Gene : Cagra.0824s0066 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12604:SF2 - X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 6 Genomic Order:  66
Name:  ? Cagra.0824s0066 Secondary Identifier:  ? PAC:28899938
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0066 0.5kb upstream 0.5kb upstream 5464 true Scaffold824: 221197-226660 Capsella grandiflora
Cagra.0824s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 226161-226660 Capsella grandiflora
Cagra.0824s0066 0.5kb downstream 0.5kb downstream 5464 true Scaffold824: 220697-226160 Capsella grandiflora
Cagra.0824s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 220697-221196 Capsella grandiflora
Cagra.0824s0066 1.0kb upstream 1.0kb upstream 5964 true Scaffold824: 221197-227160 Capsella grandiflora
Cagra.0824s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 226161-227160 Capsella grandiflora
Cagra.0824s0066 1.0kb downstream 1.0kb downstream 5964 true Scaffold824: 220197-226160 Capsella grandiflora
Cagra.0824s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 220197-221196 Capsella grandiflora
Cagra.0824s0066 2.0kb upstream 2.0kb upstream 6964 true Scaffold824: 221197-228160 Capsella grandiflora
Cagra.0824s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 226161-228160 Capsella grandiflora
Cagra.0824s0066 2.0kb downstream 2.0kb downstream 6964 true Scaffold824: 219197-226160 Capsella grandiflora
Cagra.0824s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 219197-221196 Capsella grandiflora
Cagra.0824s0066 5.0kb upstream 5.0kb upstream 9964 true Scaffold824: 221197-231160 Capsella grandiflora
Cagra.0824s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 226161-231160 Capsella grandiflora
Cagra.0824s0066 5.0kb downstream 5.0kb downstream 9964 true Scaffold824: 216197-226160 Capsella grandiflora
Cagra.0824s0066 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 216197-221196 Capsella grandiflora
Cagra.0824s0066 10.0kb upstream 10.0kb upstream 14964 true Scaffold824: 221197-236160 Capsella grandiflora
Cagra.0824s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 226161-236160 Capsella grandiflora
Cagra.0824s0066 10.0kb downstream 10.0kb downstream 14964 true Scaffold824: 211197-226160 Capsella grandiflora
Cagra.0824s0066 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 211197-221196 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378911 5261 Brassicaceae View MSA
123837028 5264 Brassicales-Malvales View MSA
124346982 5266 SBM View MSA
124245884 5268 Malvidae View MSA
124069563 5270 Rosid View MSA
123741981 5271 Pentapetalae View MSA
122794282 5272 Eudicot View MSA
122048334 5273 Angiosperm View MSA
121348405 5274 Embryophyte View MSA
123427822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain