Gene : Cagra.0824s0078 C. grandiflora v1.1
Defline:  (1 of 5) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  78
Name:  ? Cagra.0824s0078 Secondary Identifier:  ? PAC:28899948
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0078 0.5kb upstream 0.5kb upstream 5655 true Scaffold824: 265920-271574 Capsella grandiflora
Cagra.0824s0078 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 271075-271574 Capsella grandiflora
Cagra.0824s0078 0.5kb downstream 0.5kb downstream 5655 true Scaffold824: 265420-271074 Capsella grandiflora
Cagra.0824s0078 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 265420-265919 Capsella grandiflora
Cagra.0824s0078 1.0kb upstream 1.0kb upstream 6155 true Scaffold824: 265920-272074 Capsella grandiflora
Cagra.0824s0078 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 271075-272074 Capsella grandiflora
Cagra.0824s0078 1.0kb downstream 1.0kb downstream 6155 true Scaffold824: 264920-271074 Capsella grandiflora
Cagra.0824s0078 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 264920-265919 Capsella grandiflora
Cagra.0824s0078 2.0kb upstream 2.0kb upstream 7155 true Scaffold824: 265920-273074 Capsella grandiflora
Cagra.0824s0078 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 271075-273074 Capsella grandiflora
Cagra.0824s0078 2.0kb downstream 2.0kb downstream 7155 true Scaffold824: 263920-271074 Capsella grandiflora
Cagra.0824s0078 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 263920-265919 Capsella grandiflora
Cagra.0824s0078 5.0kb upstream 5.0kb upstream 10155 true Scaffold824: 265920-276074 Capsella grandiflora
Cagra.0824s0078 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 271075-276074 Capsella grandiflora
Cagra.0824s0078 5.0kb downstream 5.0kb downstream 10155 true Scaffold824: 260920-271074 Capsella grandiflora
Cagra.0824s0078 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 260920-265919 Capsella grandiflora
Cagra.0824s0078 10.0kb upstream 10.0kb upstream 15155 true Scaffold824: 265920-281074 Capsella grandiflora
Cagra.0824s0078 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 271075-281074 Capsella grandiflora
Cagra.0824s0078 10.0kb downstream 10.0kb downstream 15155 true Scaffold824: 255920-271074 Capsella grandiflora
Cagra.0824s0078 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 255920-265919 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376233 5261 Brassicaceae View MSA
123835041 5264 Brassicales-Malvales View MSA
124338426 5266 SBM View MSA
124250449 5268 Malvidae View MSA
124069029 5270 Rosid View MSA
123741406 5271 Pentapetalae View MSA
122770044 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain