Gene : Cagra.0824s0071 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11801 - SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION Genomic Order:  71
Name:  ? Cagra.0824s0071 Secondary Identifier:  ? PAC:28900076
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0071 0.5kb upstream 0.5kb upstream 3985 true Scaffold824: 242632-246616 Capsella grandiflora
Cagra.0824s0071 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 242632-243131 Capsella grandiflora
Cagra.0824s0071 0.5kb downstream 0.5kb downstream 3985 true Scaffold824: 243132-247116 Capsella grandiflora
Cagra.0824s0071 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 246617-247116 Capsella grandiflora
Cagra.0824s0071 1.0kb upstream 1.0kb upstream 4485 true Scaffold824: 242132-246616 Capsella grandiflora
Cagra.0824s0071 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 242132-243131 Capsella grandiflora
Cagra.0824s0071 1.0kb downstream 1.0kb downstream 4485 true Scaffold824: 243132-247616 Capsella grandiflora
Cagra.0824s0071 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 246617-247616 Capsella grandiflora
Cagra.0824s0071 2.0kb upstream 2.0kb upstream 5485 true Scaffold824: 241132-246616 Capsella grandiflora
Cagra.0824s0071 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 241132-243131 Capsella grandiflora
Cagra.0824s0071 2.0kb downstream 2.0kb downstream 5485 true Scaffold824: 243132-248616 Capsella grandiflora
Cagra.0824s0071 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 246617-248616 Capsella grandiflora
Cagra.0824s0071 5.0kb upstream 5.0kb upstream 8485 true Scaffold824: 238132-246616 Capsella grandiflora
Cagra.0824s0071 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 238132-243131 Capsella grandiflora
Cagra.0824s0071 5.0kb downstream 5.0kb downstream 8485 true Scaffold824: 243132-251616 Capsella grandiflora
Cagra.0824s0071 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 246617-251616 Capsella grandiflora
Cagra.0824s0071 10.0kb upstream 10.0kb upstream 13485 true Scaffold824: 233132-246616 Capsella grandiflora
Cagra.0824s0071 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 233132-243131 Capsella grandiflora
Cagra.0824s0071 10.0kb downstream 10.0kb downstream 13485 true Scaffold824: 243132-256616 Capsella grandiflora
Cagra.0824s0071 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 246617-256616 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365768 5261 Brassicaceae View MSA
123837315 5264 Brassicales-Malvales View MSA
124342395 5266 SBM View MSA
124238773 5268 Malvidae View MSA
124067056 5270 Rosid View MSA
123736368 5271 Pentapetalae View MSA
122785651 5272 Eudicot View MSA
122044134 5273 Angiosperm View MSA
121347247 5274 Embryophyte View MSA
123380519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain