Gene : Cagra.0824s0095 C. grandiflora v1.1
Defline:  (1 of 2) 3.6.4.8 - Proteasome ATPase / RP triple-A protein Genomic Order:  95
Name:  ? Cagra.0824s0095 Secondary Identifier:  ? PAC:28899979
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0095 0.5kb upstream 0.5kb upstream 2191 true Scaffold824: 326497-328687 Capsella grandiflora
Cagra.0824s0095 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 328188-328687 Capsella grandiflora
Cagra.0824s0095 0.5kb downstream 0.5kb downstream 2191 true Scaffold824: 325997-328187 Capsella grandiflora
Cagra.0824s0095 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 325997-326496 Capsella grandiflora
Cagra.0824s0095 1.0kb upstream 1.0kb upstream 2691 true Scaffold824: 326497-329187 Capsella grandiflora
Cagra.0824s0095 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 328188-329187 Capsella grandiflora
Cagra.0824s0095 1.0kb downstream 1.0kb downstream 2691 true Scaffold824: 325497-328187 Capsella grandiflora
Cagra.0824s0095 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 325497-326496 Capsella grandiflora
Cagra.0824s0095 2.0kb upstream 2.0kb upstream 3691 true Scaffold824: 326497-330187 Capsella grandiflora
Cagra.0824s0095 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 328188-330187 Capsella grandiflora
Cagra.0824s0095 2.0kb downstream 2.0kb downstream 3691 true Scaffold824: 324497-328187 Capsella grandiflora
Cagra.0824s0095 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 324497-326496 Capsella grandiflora
Cagra.0824s0095 5.0kb upstream 5.0kb upstream 6691 true Scaffold824: 326497-333187 Capsella grandiflora
Cagra.0824s0095 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 328188-333187 Capsella grandiflora
Cagra.0824s0095 5.0kb downstream 5.0kb downstream 6691 true Scaffold824: 321497-328187 Capsella grandiflora
Cagra.0824s0095 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 321497-326496 Capsella grandiflora
Cagra.0824s0095 10.0kb upstream 10.0kb upstream 11691 true Scaffold824: 326497-338187 Capsella grandiflora
Cagra.0824s0095 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 328188-338187 Capsella grandiflora
Cagra.0824s0095 10.0kb downstream 10.0kb downstream 11691 true Scaffold824: 316497-328187 Capsella grandiflora
Cagra.0824s0095 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 316497-326496 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334364 5261 Brassicaceae Singleton cluster - no MSA
123841991 5264 Brassicales-Malvales View MSA
124323169 5266 SBM View MSA
124252896 5268 Malvidae View MSA
124068785 5270 Rosid View MSA
123737965 5271 Pentapetalae View MSA
122792051 5272 Eudicot View MSA
122047363 5273 Angiosperm View MSA
121351004 5274 Embryophyte View MSA
123424117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain