Gene : Cagra.0824s0105 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31008:SF3 - COP1-INTERACTING PROTEIN-RELATED PROTEIN-RELATED Genomic Order:  105
Name:  ? Cagra.0824s0105 Secondary Identifier:  ? PAC:28900065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0105 0.5kb upstream 0.5kb upstream 5174 true Scaffold824: 360840-366013 Capsella grandiflora
Cagra.0824s0105 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 360840-361339 Capsella grandiflora
Cagra.0824s0105 0.5kb downstream 0.5kb downstream 5174 true Scaffold824: 361340-366513 Capsella grandiflora
Cagra.0824s0105 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 366014-366513 Capsella grandiflora
Cagra.0824s0105 1.0kb upstream 1.0kb upstream 5674 true Scaffold824: 360340-366013 Capsella grandiflora
Cagra.0824s0105 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 360340-361339 Capsella grandiflora
Cagra.0824s0105 1.0kb downstream 1.0kb downstream 5674 true Scaffold824: 361340-367013 Capsella grandiflora
Cagra.0824s0105 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 366014-367013 Capsella grandiflora
Cagra.0824s0105 2.0kb upstream 2.0kb upstream 6674 true Scaffold824: 359340-366013 Capsella grandiflora
Cagra.0824s0105 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 359340-361339 Capsella grandiflora
Cagra.0824s0105 2.0kb downstream 2.0kb downstream 6674 true Scaffold824: 361340-368013 Capsella grandiflora
Cagra.0824s0105 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 366014-368013 Capsella grandiflora
Cagra.0824s0105 5.0kb upstream 5.0kb upstream 9674 true Scaffold824: 356340-366013 Capsella grandiflora
Cagra.0824s0105 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 356340-361339 Capsella grandiflora
Cagra.0824s0105 5.0kb downstream 5.0kb downstream 9674 true Scaffold824: 361340-371013 Capsella grandiflora
Cagra.0824s0105 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 366014-371013 Capsella grandiflora
Cagra.0824s0105 10.0kb upstream 10.0kb upstream 14674 true Scaffold824: 351340-366013 Capsella grandiflora
Cagra.0824s0105 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 351340-361339 Capsella grandiflora
Cagra.0824s0105 10.0kb downstream 10.0kb downstream 14674 true Scaffold824: 361340-376013 Capsella grandiflora
Cagra.0824s0105 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 366014-376013 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360359 5261 Brassicaceae View MSA
123797940 5264 Brassicales-Malvales View MSA
124295637 5266 SBM View MSA
124251623 5268 Malvidae View MSA
124070250 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain