Gene : Cagra.0824s0115 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21717:SF25 - MYB FAMILY TRANSCRIPTION FACTOR TRFL6-RELATED Genomic Order:  115
Name:  ? Cagra.0824s0115 Secondary Identifier:  ? PAC:28900037
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0115 0.5kb upstream 0.5kb upstream 4303 true Scaffold824: 409246-413548 Capsella grandiflora
Cagra.0824s0115 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 409246-409745 Capsella grandiflora
Cagra.0824s0115 0.5kb downstream 0.5kb downstream 4303 true Scaffold824: 409746-414048 Capsella grandiflora
Cagra.0824s0115 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 413549-414048 Capsella grandiflora
Cagra.0824s0115 1.0kb upstream 1.0kb upstream 4803 true Scaffold824: 408746-413548 Capsella grandiflora
Cagra.0824s0115 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 408746-409745 Capsella grandiflora
Cagra.0824s0115 1.0kb downstream 1.0kb downstream 4803 true Scaffold824: 409746-414548 Capsella grandiflora
Cagra.0824s0115 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 413549-414548 Capsella grandiflora
Cagra.0824s0115 2.0kb upstream 2.0kb upstream 5803 true Scaffold824: 407746-413548 Capsella grandiflora
Cagra.0824s0115 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 407746-409745 Capsella grandiflora
Cagra.0824s0115 2.0kb downstream 2.0kb downstream 5803 true Scaffold824: 409746-415548 Capsella grandiflora
Cagra.0824s0115 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 413549-415548 Capsella grandiflora
Cagra.0824s0115 5.0kb upstream 5.0kb upstream 8803 true Scaffold824: 404746-413548 Capsella grandiflora
Cagra.0824s0115 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 404746-409745 Capsella grandiflora
Cagra.0824s0115 5.0kb downstream 5.0kb downstream 8803 true Scaffold824: 409746-418548 Capsella grandiflora
Cagra.0824s0115 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 413549-418548 Capsella grandiflora
Cagra.0824s0115 10.0kb upstream 10.0kb upstream 13803 true Scaffold824: 399746-413548 Capsella grandiflora
Cagra.0824s0115 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 399746-409745 Capsella grandiflora
Cagra.0824s0115 10.0kb downstream 10.0kb downstream 13803 true Scaffold824: 409746-423548 Capsella grandiflora
Cagra.0824s0115 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 413549-423548 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367374 5261 Brassicaceae View MSA
123841384 5264 Brassicales-Malvales View MSA
124346617 5266 SBM View MSA
124252026 5268 Malvidae View MSA
124061716 5270 Rosid View MSA
123747162 5271 Pentapetalae View MSA
122792164 5272 Eudicot View MSA
122046145 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348022 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain