Gene : Cagra.0821s0003 C. grandiflora v1.1
Defline:  (1 of 1) PF10693 - Protein of unknown function (DUF2499) (DUF2499) Genomic Order:  3
Name:  ? Cagra.0821s0003 Secondary Identifier:  ? PAC:28917776
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0821s0003 0.5kb upstream 0.5kb upstream 2186 true Scaffold821: 5296-7481 Capsella grandiflora
Cagra.0821s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold821: 5296-5795 Capsella grandiflora
Cagra.0821s0003 0.5kb downstream 0.5kb downstream 2186 true Scaffold821: 5796-7981 Capsella grandiflora
Cagra.0821s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold821: 7482-7981 Capsella grandiflora
Cagra.0821s0003 1.0kb upstream 1.0kb upstream 2686 true Scaffold821: 4796-7481 Capsella grandiflora
Cagra.0821s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold821: 4796-5795 Capsella grandiflora
Cagra.0821s0003 1.0kb downstream 1.0kb downstream 2686 true Scaffold821: 5796-8481 Capsella grandiflora
Cagra.0821s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold821: 7482-8481 Capsella grandiflora
Cagra.0821s0003 2.0kb upstream 2.0kb upstream 3686 true Scaffold821: 3796-7481 Capsella grandiflora
Cagra.0821s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold821: 3796-5795 Capsella grandiflora
Cagra.0821s0003 2.0kb downstream 2.0kb downstream 3686 true Scaffold821: 5796-9481 Capsella grandiflora
Cagra.0821s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold821: 7482-9481 Capsella grandiflora
Cagra.0821s0003 5.0kb upstream 5.0kb upstream 6686 true Scaffold821: 796-7481 Capsella grandiflora
Cagra.0821s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold821: 796-5795 Capsella grandiflora
Cagra.0821s0003 5.0kb downstream 5.0kb downstream 6686 true Scaffold821: 5796-12481 Capsella grandiflora
Cagra.0821s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold821: 7482-12481 Capsella grandiflora
Cagra.0821s0003 10.0kb upstream 10.0kb upstream 7481 true Scaffold821: 1-7481 Capsella grandiflora
Cagra.0821s0003 10.0kb upstream 10.0kb upstream 5795 false Scaffold821: 1-5795 Capsella grandiflora
Cagra.0821s0003 10.0kb downstream 10.0kb downstream 11686 true Scaffold821: 5796-17481 Capsella grandiflora
Cagra.0821s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold821: 7482-17481 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367164 5261 Brassicaceae View MSA
123837090 5264 Brassicales-Malvales View MSA
124340882 5266 SBM View MSA
124237757 5268 Malvidae View MSA
124072298 5270 Rosid View MSA
123741098 5271 Pentapetalae View MSA
122793165 5272 Eudicot View MSA
122043045 5273 Angiosperm View MSA
121348068 5274 Embryophyte View MSA
123427826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain