Gene : Cagra.0821s0004 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10634:SF38 - ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1-RELATED Genomic Order:  4
Name:  ? Cagra.0821s0004 Secondary Identifier:  ? PAC:28917774
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0821s0004 0.5kb upstream 0.5kb upstream 1875 true Scaffold821: 7876-9750 Capsella grandiflora
Cagra.0821s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold821: 7876-8375 Capsella grandiflora
Cagra.0821s0004 0.5kb downstream 0.5kb downstream 1875 true Scaffold821: 8376-10250 Capsella grandiflora
Cagra.0821s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold821: 9751-10250 Capsella grandiflora
Cagra.0821s0004 1.0kb upstream 1.0kb upstream 2375 true Scaffold821: 7376-9750 Capsella grandiflora
Cagra.0821s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold821: 7376-8375 Capsella grandiflora
Cagra.0821s0004 1.0kb downstream 1.0kb downstream 2375 true Scaffold821: 8376-10750 Capsella grandiflora
Cagra.0821s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold821: 9751-10750 Capsella grandiflora
Cagra.0821s0004 2.0kb upstream 2.0kb upstream 3375 true Scaffold821: 6376-9750 Capsella grandiflora
Cagra.0821s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold821: 6376-8375 Capsella grandiflora
Cagra.0821s0004 2.0kb downstream 2.0kb downstream 3375 true Scaffold821: 8376-11750 Capsella grandiflora
Cagra.0821s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold821: 9751-11750 Capsella grandiflora
Cagra.0821s0004 5.0kb upstream 5.0kb upstream 6375 true Scaffold821: 3376-9750 Capsella grandiflora
Cagra.0821s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold821: 3376-8375 Capsella grandiflora
Cagra.0821s0004 5.0kb downstream 5.0kb downstream 6375 true Scaffold821: 8376-14750 Capsella grandiflora
Cagra.0821s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold821: 9751-14750 Capsella grandiflora
Cagra.0821s0004 10.0kb upstream 10.0kb upstream 9750 true Scaffold821: 1-9750 Capsella grandiflora
Cagra.0821s0004 10.0kb upstream 10.0kb upstream 8375 false Scaffold821: 1-8375 Capsella grandiflora
Cagra.0821s0004 10.0kb downstream 10.0kb downstream 9962 true Scaffold821: 8376-18337 Capsella grandiflora
Cagra.0821s0004 10.0kb downstream 10.0kb downstream 8587 false Scaffold821: 9751-18337 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370301 5261 Brassicaceae View MSA
123799935 5264 Brassicales-Malvales View MSA
124297403 5266 SBM View MSA
124251311 5268 Malvidae View MSA
124063038 5270 Rosid View MSA
123746917 5271 Pentapetalae View MSA
122796829 5272 Eudicot View MSA
122050732 5273 Angiosperm View MSA
121349866 5274 Embryophyte View MSA
123428230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain