Gene : Cagra.0824s0001 C. grandiflora v1.1
Defline:  (1 of 1) PF01464 - Transglycosylase SLT domain (SLT) Genomic Order:  1
Name:  ? Cagra.0824s0001 Secondary Identifier:  ? PAC:28899956
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0001 0.5kb upstream 0.5kb upstream 3942 true Scaffold824: 484-4425 Capsella grandiflora
Cagra.0824s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 3926-4425 Capsella grandiflora
Cagra.0824s0001 0.5kb downstream 0.5kb downstream 3925 true Scaffold824: 1-3925 Capsella grandiflora
Cagra.0824s0001 0.5kb downstream 0.5kb downstream 483 false Scaffold824: 1-483 Capsella grandiflora
Cagra.0824s0001 1.0kb upstream 1.0kb upstream 4442 true Scaffold824: 484-4925 Capsella grandiflora
Cagra.0824s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 3926-4925 Capsella grandiflora
Cagra.0824s0001 1.0kb downstream 1.0kb downstream 3925 true Scaffold824: 1-3925 Capsella grandiflora
Cagra.0824s0001 1.0kb downstream 1.0kb downstream 483 false Scaffold824: 1-483 Capsella grandiflora
Cagra.0824s0001 2.0kb upstream 2.0kb upstream 5442 true Scaffold824: 484-5925 Capsella grandiflora
Cagra.0824s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 3926-5925 Capsella grandiflora
Cagra.0824s0001 2.0kb downstream 2.0kb downstream 3925 true Scaffold824: 1-3925 Capsella grandiflora
Cagra.0824s0001 2.0kb downstream 2.0kb downstream 483 false Scaffold824: 1-483 Capsella grandiflora
Cagra.0824s0001 5.0kb upstream 5.0kb upstream 8442 true Scaffold824: 484-8925 Capsella grandiflora
Cagra.0824s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 3926-8925 Capsella grandiflora
Cagra.0824s0001 5.0kb downstream 5.0kb downstream 3925 true Scaffold824: 1-3925 Capsella grandiflora
Cagra.0824s0001 5.0kb downstream 5.0kb downstream 483 false Scaffold824: 1-483 Capsella grandiflora
Cagra.0824s0001 10.0kb upstream 10.0kb upstream 13442 true Scaffold824: 484-13925 Capsella grandiflora
Cagra.0824s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 3926-13925 Capsella grandiflora
Cagra.0824s0001 10.0kb downstream 10.0kb downstream 3925 true Scaffold824: 1-3925 Capsella grandiflora
Cagra.0824s0001 10.0kb downstream 10.0kb downstream 483 false Scaffold824: 1-483 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026274 5273 Angiosperm View MSA
122374503 5261 Brassicaceae View MSA
123828343 5264 Brassicales-Malvales View MSA
124343592 5266 SBM View MSA
124254439 5268 Malvidae View MSA
124063364 5270 Rosid View MSA
123738114 5271 Pentapetalae View MSA
122789993 5272 Eudicot View MSA
121350872 5274 Embryophyte View MSA
123381917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain