Gene : Cagra.0824s0030 C. grandiflora v1.1
Defline:  (1 of 1) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase Genomic Order:  30
Name:  ? Cagra.0824s0030 Secondary Identifier:  ? PAC:28899934
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0030 0.5kb upstream 0.5kb upstream 4147 true Scaffold824: 101831-105977 Capsella grandiflora
Cagra.0824s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 105478-105977 Capsella grandiflora
Cagra.0824s0030 0.5kb downstream 0.5kb downstream 4147 true Scaffold824: 101331-105477 Capsella grandiflora
Cagra.0824s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 101331-101830 Capsella grandiflora
Cagra.0824s0030 1.0kb upstream 1.0kb upstream 4647 true Scaffold824: 101831-106477 Capsella grandiflora
Cagra.0824s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 105478-106477 Capsella grandiflora
Cagra.0824s0030 1.0kb downstream 1.0kb downstream 4647 true Scaffold824: 100831-105477 Capsella grandiflora
Cagra.0824s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 100831-101830 Capsella grandiflora
Cagra.0824s0030 2.0kb upstream 2.0kb upstream 5647 true Scaffold824: 101831-107477 Capsella grandiflora
Cagra.0824s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 105478-107477 Capsella grandiflora
Cagra.0824s0030 2.0kb downstream 2.0kb downstream 5647 true Scaffold824: 99831-105477 Capsella grandiflora
Cagra.0824s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 99831-101830 Capsella grandiflora
Cagra.0824s0030 5.0kb upstream 5.0kb upstream 8647 true Scaffold824: 101831-110477 Capsella grandiflora
Cagra.0824s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 105478-110477 Capsella grandiflora
Cagra.0824s0030 5.0kb downstream 5.0kb downstream 8647 true Scaffold824: 96831-105477 Capsella grandiflora
Cagra.0824s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 96831-101830 Capsella grandiflora
Cagra.0824s0030 10.0kb upstream 10.0kb upstream 13647 true Scaffold824: 101831-115477 Capsella grandiflora
Cagra.0824s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 105478-115477 Capsella grandiflora
Cagra.0824s0030 10.0kb downstream 10.0kb downstream 13647 true Scaffold824: 91831-105477 Capsella grandiflora
Cagra.0824s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 91831-101830 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369139 5261 Brassicaceae View MSA
123833057 5264 Brassicales-Malvales View MSA
124338291 5266 SBM View MSA
124241218 5268 Malvidae View MSA
124066723 5270 Rosid View MSA
123740447 5271 Pentapetalae View MSA
122785906 5272 Eudicot View MSA
122046211 5273 Angiosperm View MSA
123429023 5275 Viridiplantae View MSA
121347340 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain