Gene : Cagra.0824s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  43
Name:  ? Cagra.0824s0043 Secondary Identifier:  ? PAC:28899952
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0043 0.5kb upstream 0.5kb upstream 4189 true Scaffold824: 150478-154666 Capsella grandiflora
Cagra.0824s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 150478-150977 Capsella grandiflora
Cagra.0824s0043 0.5kb downstream 0.5kb downstream 4189 true Scaffold824: 150978-155166 Capsella grandiflora
Cagra.0824s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 154667-155166 Capsella grandiflora
Cagra.0824s0043 1.0kb upstream 1.0kb upstream 4689 true Scaffold824: 149978-154666 Capsella grandiflora
Cagra.0824s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 149978-150977 Capsella grandiflora
Cagra.0824s0043 1.0kb downstream 1.0kb downstream 4689 true Scaffold824: 150978-155666 Capsella grandiflora
Cagra.0824s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 154667-155666 Capsella grandiflora
Cagra.0824s0043 2.0kb upstream 2.0kb upstream 5689 true Scaffold824: 148978-154666 Capsella grandiflora
Cagra.0824s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 148978-150977 Capsella grandiflora
Cagra.0824s0043 2.0kb downstream 2.0kb downstream 5689 true Scaffold824: 150978-156666 Capsella grandiflora
Cagra.0824s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 154667-156666 Capsella grandiflora
Cagra.0824s0043 5.0kb upstream 5.0kb upstream 8689 true Scaffold824: 145978-154666 Capsella grandiflora
Cagra.0824s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 145978-150977 Capsella grandiflora
Cagra.0824s0043 5.0kb downstream 5.0kb downstream 8689 true Scaffold824: 150978-159666 Capsella grandiflora
Cagra.0824s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 154667-159666 Capsella grandiflora
Cagra.0824s0043 10.0kb upstream 10.0kb upstream 13689 true Scaffold824: 140978-154666 Capsella grandiflora
Cagra.0824s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 140978-150977 Capsella grandiflora
Cagra.0824s0043 10.0kb downstream 10.0kb downstream 13689 true Scaffold824: 150978-164666 Capsella grandiflora
Cagra.0824s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 154667-164666 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373721 5261 Brassicaceae View MSA
123838625 5264 Brassicales-Malvales View MSA
124340565 5266 SBM View MSA
124242246 5268 Malvidae View MSA
124060991 5270 Rosid View MSA
123739581 5271 Pentapetalae View MSA
122792894 5272 Eudicot View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain