Gene : Cagra.0824s0042 C. grandiflora v1.1
Defline:  (1 of 1) PF00569//PF00628//PF02135//PF08214 - Zinc finger, ZZ type (ZZ) // PHD-finger (PHD) // TAZ zinc finger (zf-TAZ) // Histone acetylation protein (HAT_KAT11) Genomic Order:  42
Name:  ? Cagra.0824s0042 Secondary Identifier:  ? PAC:28900021
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0042 0.5kb upstream 0.5kb upstream 9260 true Scaffold824: 141514-150773 Capsella grandiflora
Cagra.0824s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 141514-142013 Capsella grandiflora
Cagra.0824s0042 0.5kb downstream 0.5kb downstream 9260 true Scaffold824: 142014-151273 Capsella grandiflora
Cagra.0824s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 150774-151273 Capsella grandiflora
Cagra.0824s0042 1.0kb upstream 1.0kb upstream 9760 true Scaffold824: 141014-150773 Capsella grandiflora
Cagra.0824s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 141014-142013 Capsella grandiflora
Cagra.0824s0042 1.0kb downstream 1.0kb downstream 9760 true Scaffold824: 142014-151773 Capsella grandiflora
Cagra.0824s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 150774-151773 Capsella grandiflora
Cagra.0824s0042 2.0kb upstream 2.0kb upstream 10760 true Scaffold824: 140014-150773 Capsella grandiflora
Cagra.0824s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 140014-142013 Capsella grandiflora
Cagra.0824s0042 2.0kb downstream 2.0kb downstream 10760 true Scaffold824: 142014-152773 Capsella grandiflora
Cagra.0824s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 150774-152773 Capsella grandiflora
Cagra.0824s0042 5.0kb upstream 5.0kb upstream 13760 true Scaffold824: 137014-150773 Capsella grandiflora
Cagra.0824s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 137014-142013 Capsella grandiflora
Cagra.0824s0042 5.0kb downstream 5.0kb downstream 13760 true Scaffold824: 142014-155773 Capsella grandiflora
Cagra.0824s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 150774-155773 Capsella grandiflora
Cagra.0824s0042 10.0kb upstream 10.0kb upstream 18760 true Scaffold824: 132014-150773 Capsella grandiflora
Cagra.0824s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 132014-142013 Capsella grandiflora
Cagra.0824s0042 10.0kb downstream 10.0kb downstream 18760 true Scaffold824: 142014-160773 Capsella grandiflora
Cagra.0824s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 150774-160773 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369482 5261 Brassicaceae View MSA
123839846 5264 Brassicales-Malvales View MSA
124344458 5266 SBM View MSA
124238296 5268 Malvidae View MSA
124067227 5270 Rosid View MSA
123747259 5271 Pentapetalae View MSA
122789535 5272 Eudicot View MSA
122047201 5273 Angiosperm View MSA
121350917 5274 Embryophyte View MSA
123426645 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain