Gene : Cagra.0802s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10794:SF38 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  11
Name:  ? Cagra.0802s0011 Secondary Identifier:  ? PAC:28895817
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0802s0011 0.5kb upstream 0.5kb upstream 2177 true Scaffold802: 23955-26131 Capsella grandiflora
Cagra.0802s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold802: 23955-24454 Capsella grandiflora
Cagra.0802s0011 0.5kb downstream 0.5kb downstream 2177 true Scaffold802: 24455-26631 Capsella grandiflora
Cagra.0802s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold802: 26132-26631 Capsella grandiflora
Cagra.0802s0011 1.0kb upstream 1.0kb upstream 2677 true Scaffold802: 23455-26131 Capsella grandiflora
Cagra.0802s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold802: 23455-24454 Capsella grandiflora
Cagra.0802s0011 1.0kb downstream 1.0kb downstream 2677 true Scaffold802: 24455-27131 Capsella grandiflora
Cagra.0802s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold802: 26132-27131 Capsella grandiflora
Cagra.0802s0011 2.0kb upstream 2.0kb upstream 3677 true Scaffold802: 22455-26131 Capsella grandiflora
Cagra.0802s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold802: 22455-24454 Capsella grandiflora
Cagra.0802s0011 2.0kb downstream 2.0kb downstream 3677 true Scaffold802: 24455-28131 Capsella grandiflora
Cagra.0802s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold802: 26132-28131 Capsella grandiflora
Cagra.0802s0011 5.0kb upstream 5.0kb upstream 6677 true Scaffold802: 19455-26131 Capsella grandiflora
Cagra.0802s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold802: 19455-24454 Capsella grandiflora
Cagra.0802s0011 5.0kb downstream 5.0kb downstream 6677 true Scaffold802: 24455-31131 Capsella grandiflora
Cagra.0802s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold802: 26132-31131 Capsella grandiflora
Cagra.0802s0011 10.0kb upstream 10.0kb upstream 11677 true Scaffold802: 14455-26131 Capsella grandiflora
Cagra.0802s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold802: 14455-24454 Capsella grandiflora
Cagra.0802s0011 10.0kb downstream 10.0kb downstream 10624 true Scaffold802: 24455-35078 Capsella grandiflora
Cagra.0802s0011 10.0kb downstream 10.0kb downstream 8947 false Scaffold802: 26132-35078 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027170 5273 Angiosperm View MSA
122334331 5261 Brassicaceae Singleton cluster - no MSA
123775184 5264 Brassicales-Malvales Singleton cluster - no MSA
124273598 5266 SBM Singleton cluster - no MSA
124249958 5268 Malvidae View MSA
124061477 5270 Rosid View MSA
123739167 5271 Pentapetalae View MSA
122788246 5272 Eudicot View MSA
121344310 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain