Gene : Cagra.0804s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33271:SF7 - PLASTID TRANSCRIPTIONALLY ACTIVE 18 Genomic Order:  11
Name:  ? Cagra.0804s0011 Secondary Identifier:  ? PAC:28907176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0804s0011 0.5kb upstream 0.5kb upstream 1702 true Scaffold804: 40909-42610 Capsella grandiflora
Cagra.0804s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold804: 40909-41408 Capsella grandiflora
Cagra.0804s0011 0.5kb downstream 0.5kb downstream 1467 true Scaffold804: 41409-42875 Capsella grandiflora
Cagra.0804s0011 0.5kb downstream 0.5kb downstream 265 false Scaffold804: 42611-42875 Capsella grandiflora
Cagra.0804s0011 1.0kb upstream 1.0kb upstream 2202 true Scaffold804: 40409-42610 Capsella grandiflora
Cagra.0804s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold804: 40409-41408 Capsella grandiflora
Cagra.0804s0011 1.0kb downstream 1.0kb downstream 1467 true Scaffold804: 41409-42875 Capsella grandiflora
Cagra.0804s0011 1.0kb downstream 1.0kb downstream 265 false Scaffold804: 42611-42875 Capsella grandiflora
Cagra.0804s0011 2.0kb upstream 2.0kb upstream 3202 true Scaffold804: 39409-42610 Capsella grandiflora
Cagra.0804s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold804: 39409-41408 Capsella grandiflora
Cagra.0804s0011 2.0kb downstream 2.0kb downstream 1467 true Scaffold804: 41409-42875 Capsella grandiflora
Cagra.0804s0011 2.0kb downstream 2.0kb downstream 265 false Scaffold804: 42611-42875 Capsella grandiflora
Cagra.0804s0011 5.0kb upstream 5.0kb upstream 6202 true Scaffold804: 36409-42610 Capsella grandiflora
Cagra.0804s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold804: 36409-41408 Capsella grandiflora
Cagra.0804s0011 5.0kb downstream 5.0kb downstream 1467 true Scaffold804: 41409-42875 Capsella grandiflora
Cagra.0804s0011 5.0kb downstream 5.0kb downstream 265 false Scaffold804: 42611-42875 Capsella grandiflora
Cagra.0804s0011 10.0kb upstream 10.0kb upstream 11202 true Scaffold804: 31409-42610 Capsella grandiflora
Cagra.0804s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold804: 31409-41408 Capsella grandiflora
Cagra.0804s0011 10.0kb downstream 10.0kb downstream 1467 true Scaffold804: 41409-42875 Capsella grandiflora
Cagra.0804s0011 10.0kb downstream 10.0kb downstream 265 false Scaffold804: 42611-42875 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365655 5261 Brassicaceae View MSA
123832756 5264 Brassicales-Malvales View MSA
124346131 5266 SBM View MSA
124237058 5268 Malvidae View MSA
124065223 5270 Rosid View MSA
123741295 5271 Pentapetalae View MSA
122787769 5272 Eudicot View MSA
122043400 5273 Angiosperm View MSA
121346471 5274 Embryophyte View MSA
123380389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain