Gene : Cagra.0805s0004 C. grandiflora v1.1
Defline:  (1 of 361) PF01535 - PPR repeat (PPR) Genomic Order:  4
Name:  ? Cagra.0805s0004 Secondary Identifier:  ? PAC:28901491
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0805s0004 0.5kb upstream 0.5kb upstream 2559 true Scaffold805: 9357-11915 Capsella grandiflora
Cagra.0805s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold805: 9357-9856 Capsella grandiflora
Cagra.0805s0004 0.5kb downstream 0.5kb downstream 2559 true Scaffold805: 9857-12415 Capsella grandiflora
Cagra.0805s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold805: 11916-12415 Capsella grandiflora
Cagra.0805s0004 1.0kb upstream 1.0kb upstream 3059 true Scaffold805: 8857-11915 Capsella grandiflora
Cagra.0805s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold805: 8857-9856 Capsella grandiflora
Cagra.0805s0004 1.0kb downstream 1.0kb downstream 3059 true Scaffold805: 9857-12915 Capsella grandiflora
Cagra.0805s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold805: 11916-12915 Capsella grandiflora
Cagra.0805s0004 2.0kb upstream 2.0kb upstream 4059 true Scaffold805: 7857-11915 Capsella grandiflora
Cagra.0805s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold805: 7857-9856 Capsella grandiflora
Cagra.0805s0004 2.0kb downstream 2.0kb downstream 4059 true Scaffold805: 9857-13915 Capsella grandiflora
Cagra.0805s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold805: 11916-13915 Capsella grandiflora
Cagra.0805s0004 5.0kb upstream 5.0kb upstream 7059 true Scaffold805: 4857-11915 Capsella grandiflora
Cagra.0805s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold805: 4857-9856 Capsella grandiflora
Cagra.0805s0004 5.0kb downstream 5.0kb downstream 7059 true Scaffold805: 9857-16915 Capsella grandiflora
Cagra.0805s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold805: 11916-16915 Capsella grandiflora
Cagra.0805s0004 10.0kb upstream 10.0kb upstream 11915 true Scaffold805: 1-11915 Capsella grandiflora
Cagra.0805s0004 10.0kb upstream 10.0kb upstream 9856 false Scaffold805: 1-9856 Capsella grandiflora
Cagra.0805s0004 10.0kb downstream 10.0kb downstream 12059 true Scaffold805: 9857-21915 Capsella grandiflora
Cagra.0805s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold805: 11916-21915 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371863 5261 Brassicaceae View MSA
123829746 5264 Brassicales-Malvales View MSA
124344114 5266 SBM View MSA
124240333 5268 Malvidae View MSA
124063898 5270 Rosid View MSA
123736801 5271 Pentapetalae View MSA
122790461 5272 Eudicot View MSA
122047687 5273 Angiosperm View MSA
121347538 5274 Embryophyte View MSA
123380566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain