Gene : Cagra.0807s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33159:SF4 - RPM1-INTERACTING PROTEIN 4 FAMILY PROTEIN Genomic Order:  8
Name:  ? Cagra.0807s0008 Secondary Identifier:  ? PAC:28916448
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0807s0008 0.5kb upstream 0.5kb upstream 1525 true Scaffold807: 31200-32724 Capsella grandiflora
Cagra.0807s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold807: 31200-31699 Capsella grandiflora
Cagra.0807s0008 0.5kb downstream 0.5kb downstream 1525 true Scaffold807: 31700-33224 Capsella grandiflora
Cagra.0807s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold807: 32725-33224 Capsella grandiflora
Cagra.0807s0008 1.0kb upstream 1.0kb upstream 2025 true Scaffold807: 30700-32724 Capsella grandiflora
Cagra.0807s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold807: 30700-31699 Capsella grandiflora
Cagra.0807s0008 1.0kb downstream 1.0kb downstream 2025 true Scaffold807: 31700-33724 Capsella grandiflora
Cagra.0807s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold807: 32725-33724 Capsella grandiflora
Cagra.0807s0008 2.0kb upstream 2.0kb upstream 3025 true Scaffold807: 29700-32724 Capsella grandiflora
Cagra.0807s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold807: 29700-31699 Capsella grandiflora
Cagra.0807s0008 2.0kb downstream 2.0kb downstream 3025 true Scaffold807: 31700-34724 Capsella grandiflora
Cagra.0807s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold807: 32725-34724 Capsella grandiflora
Cagra.0807s0008 5.0kb upstream 5.0kb upstream 6025 true Scaffold807: 26700-32724 Capsella grandiflora
Cagra.0807s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold807: 26700-31699 Capsella grandiflora
Cagra.0807s0008 5.0kb downstream 5.0kb downstream 6025 true Scaffold807: 31700-37724 Capsella grandiflora
Cagra.0807s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold807: 32725-37724 Capsella grandiflora
Cagra.0807s0008 10.0kb upstream 10.0kb upstream 11025 true Scaffold807: 21700-32724 Capsella grandiflora
Cagra.0807s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold807: 21700-31699 Capsella grandiflora
Cagra.0807s0008 10.0kb downstream 10.0kb downstream 11025 true Scaffold807: 31700-42724 Capsella grandiflora
Cagra.0807s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold807: 32725-42724 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378334 5261 Brassicaceae View MSA
123841175 5264 Brassicales-Malvales View MSA
124322863 5266 SBM View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain