Gene : Cagra.0807s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24375:SF183 - C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN Genomic Order:  16
Name:  ? Cagra.0807s0016 Secondary Identifier:  ? PAC:28916422
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0807s0016 0.5kb upstream 0.5kb upstream 4490 true Scaffold807: 56365-60854 Capsella grandiflora
Cagra.0807s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold807: 60355-60854 Capsella grandiflora
Cagra.0807s0016 0.5kb downstream 0.5kb downstream 4490 true Scaffold807: 55865-60354 Capsella grandiflora
Cagra.0807s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold807: 55865-56364 Capsella grandiflora
Cagra.0807s0016 1.0kb upstream 1.0kb upstream 4990 true Scaffold807: 56365-61354 Capsella grandiflora
Cagra.0807s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold807: 60355-61354 Capsella grandiflora
Cagra.0807s0016 1.0kb downstream 1.0kb downstream 4990 true Scaffold807: 55365-60354 Capsella grandiflora
Cagra.0807s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold807: 55365-56364 Capsella grandiflora
Cagra.0807s0016 2.0kb upstream 2.0kb upstream 5990 true Scaffold807: 56365-62354 Capsella grandiflora
Cagra.0807s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold807: 60355-62354 Capsella grandiflora
Cagra.0807s0016 2.0kb downstream 2.0kb downstream 5990 true Scaffold807: 54365-60354 Capsella grandiflora
Cagra.0807s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold807: 54365-56364 Capsella grandiflora
Cagra.0807s0016 5.0kb upstream 5.0kb upstream 8990 true Scaffold807: 56365-65354 Capsella grandiflora
Cagra.0807s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold807: 60355-65354 Capsella grandiflora
Cagra.0807s0016 5.0kb downstream 5.0kb downstream 8990 true Scaffold807: 51365-60354 Capsella grandiflora
Cagra.0807s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold807: 51365-56364 Capsella grandiflora
Cagra.0807s0016 10.0kb upstream 10.0kb upstream 13990 true Scaffold807: 56365-70354 Capsella grandiflora
Cagra.0807s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold807: 60355-70354 Capsella grandiflora
Cagra.0807s0016 10.0kb downstream 10.0kb downstream 13990 true Scaffold807: 46365-60354 Capsella grandiflora
Cagra.0807s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold807: 46365-56364 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363447 5261 Brassicaceae View MSA
123833995 5264 Brassicales-Malvales View MSA
124343483 5266 SBM View MSA
124240370 5268 Malvidae View MSA
124068344 5270 Rosid View MSA
123747226 5271 Pentapetalae View MSA
122792023 5272 Eudicot View MSA
122041636 5273 Angiosperm View MSA
121345682 5274 Embryophyte View MSA
123425510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain