Gene : Cagra.0812s0001 C. grandiflora v1.1
Defline:  (1 of 4) KOG0884 - Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase Genomic Order:  1
Name:  ? Cagra.0812s0001 Secondary Identifier:  ? PAC:28919379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0812s0001 0.5kb upstream 0.5kb upstream 2890 true Scaffold812: 1-2890 Capsella grandiflora
Cagra.0812s0001 0.5kb upstream 0.5kb upstream 251 false Scaffold812: 1-251 Capsella grandiflora
Cagra.0812s0001 0.5kb downstream 0.5kb downstream 3139 true Scaffold812: 252-3390 Capsella grandiflora
Cagra.0812s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold812: 2891-3390 Capsella grandiflora
Cagra.0812s0001 1.0kb upstream 1.0kb upstream 2890 true Scaffold812: 1-2890 Capsella grandiflora
Cagra.0812s0001 1.0kb upstream 1.0kb upstream 251 false Scaffold812: 1-251 Capsella grandiflora
Cagra.0812s0001 1.0kb downstream 1.0kb downstream 3639 true Scaffold812: 252-3890 Capsella grandiflora
Cagra.0812s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold812: 2891-3890 Capsella grandiflora
Cagra.0812s0001 2.0kb upstream 2.0kb upstream 2890 true Scaffold812: 1-2890 Capsella grandiflora
Cagra.0812s0001 2.0kb upstream 2.0kb upstream 251 false Scaffold812: 1-251 Capsella grandiflora
Cagra.0812s0001 2.0kb downstream 2.0kb downstream 4639 true Scaffold812: 252-4890 Capsella grandiflora
Cagra.0812s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold812: 2891-4890 Capsella grandiflora
Cagra.0812s0001 5.0kb upstream 5.0kb upstream 2890 true Scaffold812: 1-2890 Capsella grandiflora
Cagra.0812s0001 5.0kb upstream 5.0kb upstream 251 false Scaffold812: 1-251 Capsella grandiflora
Cagra.0812s0001 5.0kb downstream 5.0kb downstream 7639 true Scaffold812: 252-7890 Capsella grandiflora
Cagra.0812s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold812: 2891-7890 Capsella grandiflora
Cagra.0812s0001 10.0kb upstream 10.0kb upstream 2890 true Scaffold812: 1-2890 Capsella grandiflora
Cagra.0812s0001 10.0kb upstream 10.0kb upstream 251 false Scaffold812: 1-251 Capsella grandiflora
Cagra.0812s0001 10.0kb downstream 10.0kb downstream 12639 true Scaffold812: 252-12890 Capsella grandiflora
Cagra.0812s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold812: 2891-12890 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363456 5261 Brassicaceae View MSA
123836256 5264 Brassicales-Malvales View MSA
124345858 5266 SBM View MSA
124246508 5268 Malvidae View MSA
124071456 5270 Rosid View MSA
123751062 5271 Pentapetalae View MSA
122773901 5272 Eudicot View MSA
122043023 5273 Angiosperm View MSA
121350933 5274 Embryophyte View MSA
123428077 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain