Gene : Cagra.0812s0010 C. grandiflora v1.1
Genomic Order:  10 Name:  ? Cagra.0812s0010
Secondary Identifier:  ? PAC:28919367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0812s0010 0.5kb upstream 0.5kb upstream 1670 true Scaffold812: 46261-47930 Capsella grandiflora
Cagra.0812s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold812: 47431-47930 Capsella grandiflora
Cagra.0812s0010 0.5kb downstream 0.5kb downstream 1670 true Scaffold812: 45761-47430 Capsella grandiflora
Cagra.0812s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold812: 45761-46260 Capsella grandiflora
Cagra.0812s0010 1.0kb upstream 1.0kb upstream 2170 true Scaffold812: 46261-48430 Capsella grandiflora
Cagra.0812s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold812: 47431-48430 Capsella grandiflora
Cagra.0812s0010 1.0kb downstream 1.0kb downstream 2170 true Scaffold812: 45261-47430 Capsella grandiflora
Cagra.0812s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold812: 45261-46260 Capsella grandiflora
Cagra.0812s0010 2.0kb upstream 2.0kb upstream 3170 true Scaffold812: 46261-49430 Capsella grandiflora
Cagra.0812s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold812: 47431-49430 Capsella grandiflora
Cagra.0812s0010 2.0kb downstream 2.0kb downstream 3170 true Scaffold812: 44261-47430 Capsella grandiflora
Cagra.0812s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold812: 44261-46260 Capsella grandiflora
Cagra.0812s0010 5.0kb upstream 5.0kb upstream 6170 true Scaffold812: 46261-52430 Capsella grandiflora
Cagra.0812s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold812: 47431-52430 Capsella grandiflora
Cagra.0812s0010 5.0kb downstream 5.0kb downstream 6170 true Scaffold812: 41261-47430 Capsella grandiflora
Cagra.0812s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold812: 41261-46260 Capsella grandiflora
Cagra.0812s0010 10.0kb upstream 10.0kb upstream 11170 true Scaffold812: 46261-57430 Capsella grandiflora
Cagra.0812s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold812: 47431-57430 Capsella grandiflora
Cagra.0812s0010 10.0kb downstream 10.0kb downstream 11170 true Scaffold812: 36261-47430 Capsella grandiflora
Cagra.0812s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold812: 36261-46260 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334351 5261 Brassicaceae Singleton cluster - no MSA
123775202 5264 Brassicales-Malvales Singleton cluster - no MSA
124349783 5266 SBM View MSA
124181036 5268 Malvidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain