Gene : Cagra.0993s0110 C. grandiflora v1.1
Defline:  (1 of 1) KOG1051 - Chaperone HSP104 and related ATP-dependent Clp proteases Genomic Order:  110
Name:  ? Cagra.0993s0110 Secondary Identifier:  ? PAC:28903478
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0110 0.5kb upstream 0.5kb upstream 2328 true Scaffold993: 393137-395464 Capsella grandiflora
Cagra.0993s0110 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 394965-395464 Capsella grandiflora
Cagra.0993s0110 0.5kb downstream 0.5kb downstream 2328 true Scaffold993: 392637-394964 Capsella grandiflora
Cagra.0993s0110 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 392637-393136 Capsella grandiflora
Cagra.0993s0110 1.0kb upstream 1.0kb upstream 2828 true Scaffold993: 393137-395964 Capsella grandiflora
Cagra.0993s0110 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 394965-395964 Capsella grandiflora
Cagra.0993s0110 1.0kb downstream 1.0kb downstream 2828 true Scaffold993: 392137-394964 Capsella grandiflora
Cagra.0993s0110 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 392137-393136 Capsella grandiflora
Cagra.0993s0110 2.0kb upstream 2.0kb upstream 3828 true Scaffold993: 393137-396964 Capsella grandiflora
Cagra.0993s0110 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 394965-396964 Capsella grandiflora
Cagra.0993s0110 2.0kb downstream 2.0kb downstream 3828 true Scaffold993: 391137-394964 Capsella grandiflora
Cagra.0993s0110 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 391137-393136 Capsella grandiflora
Cagra.0993s0110 5.0kb upstream 5.0kb upstream 6828 true Scaffold993: 393137-399964 Capsella grandiflora
Cagra.0993s0110 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 394965-399964 Capsella grandiflora
Cagra.0993s0110 5.0kb downstream 5.0kb downstream 6828 true Scaffold993: 388137-394964 Capsella grandiflora
Cagra.0993s0110 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 388137-393136 Capsella grandiflora
Cagra.0993s0110 10.0kb upstream 10.0kb upstream 11828 true Scaffold993: 393137-404964 Capsella grandiflora
Cagra.0993s0110 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 394965-404964 Capsella grandiflora
Cagra.0993s0110 10.0kb downstream 10.0kb downstream 11828 true Scaffold993: 383137-394964 Capsella grandiflora
Cagra.0993s0110 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 383137-393136 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380111 5261 Brassicaceae View MSA
123802565 5264 Brassicales-Malvales View MSA
124299751 5266 SBM View MSA
124151080 5268 Malvidae View MSA
123876588 5270 Rosid View MSA
123460244 5271 Pentapetalae View MSA
122495621 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain