Gene : Cagra.0993s0113 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12081//PTHR12081:SF47 - TRANSCRIPTION FACTOR E2F Genomic Order:  113
Name:  ? Cagra.0993s0113 Secondary Identifier:  ? PAC:28903516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0113 0.5kb upstream 0.5kb upstream 4458 true Scaffold993: 404084-408541 Capsella grandiflora
Cagra.0993s0113 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 404084-404583 Capsella grandiflora
Cagra.0993s0113 0.5kb downstream 0.5kb downstream 4458 true Scaffold993: 404584-409041 Capsella grandiflora
Cagra.0993s0113 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 408542-409041 Capsella grandiflora
Cagra.0993s0113 1.0kb upstream 1.0kb upstream 4958 true Scaffold993: 403584-408541 Capsella grandiflora
Cagra.0993s0113 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 403584-404583 Capsella grandiflora
Cagra.0993s0113 1.0kb downstream 1.0kb downstream 4958 true Scaffold993: 404584-409541 Capsella grandiflora
Cagra.0993s0113 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 408542-409541 Capsella grandiflora
Cagra.0993s0113 2.0kb upstream 2.0kb upstream 5958 true Scaffold993: 402584-408541 Capsella grandiflora
Cagra.0993s0113 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 402584-404583 Capsella grandiflora
Cagra.0993s0113 2.0kb downstream 2.0kb downstream 5958 true Scaffold993: 404584-410541 Capsella grandiflora
Cagra.0993s0113 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 408542-410541 Capsella grandiflora
Cagra.0993s0113 5.0kb upstream 5.0kb upstream 8958 true Scaffold993: 399584-408541 Capsella grandiflora
Cagra.0993s0113 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 399584-404583 Capsella grandiflora
Cagra.0993s0113 5.0kb downstream 5.0kb downstream 8958 true Scaffold993: 404584-413541 Capsella grandiflora
Cagra.0993s0113 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 408542-413541 Capsella grandiflora
Cagra.0993s0113 10.0kb upstream 10.0kb upstream 13958 true Scaffold993: 394584-408541 Capsella grandiflora
Cagra.0993s0113 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 394584-404583 Capsella grandiflora
Cagra.0993s0113 10.0kb downstream 10.0kb downstream 13958 true Scaffold993: 404584-418541 Capsella grandiflora
Cagra.0993s0113 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 408542-418541 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375399 5261 Brassicaceae View MSA
123840782 5264 Brassicales-Malvales View MSA
124337913 5266 SBM View MSA
124251956 5268 Malvidae View MSA
124067172 5270 Rosid View MSA
123739560 5271 Pentapetalae View MSA
122789212 5272 Eudicot View MSA
122042305 5273 Angiosperm View MSA
121345510 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain