Gene : Cagra.0995s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11668//PTHR11668:SF243 - SERINE/THREONINE PROTEIN PHOSPHATASE Genomic Order:  3
Name:  ? Cagra.0995s0003 Secondary Identifier:  ? PAC:28920119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0995s0003 0.5kb upstream 0.5kb upstream 7451 true Scaffold995: 8004-15454 Capsella grandiflora
Cagra.0995s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold995: 8004-8503 Capsella grandiflora
Cagra.0995s0003 0.5kb downstream 0.5kb downstream 7451 true Scaffold995: 8504-15954 Capsella grandiflora
Cagra.0995s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold995: 15455-15954 Capsella grandiflora
Cagra.0995s0003 1.0kb upstream 1.0kb upstream 7951 true Scaffold995: 7504-15454 Capsella grandiflora
Cagra.0995s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold995: 7504-8503 Capsella grandiflora
Cagra.0995s0003 1.0kb downstream 1.0kb downstream 7951 true Scaffold995: 8504-16454 Capsella grandiflora
Cagra.0995s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold995: 15455-16454 Capsella grandiflora
Cagra.0995s0003 2.0kb upstream 2.0kb upstream 8951 true Scaffold995: 6504-15454 Capsella grandiflora
Cagra.0995s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold995: 6504-8503 Capsella grandiflora
Cagra.0995s0003 2.0kb downstream 2.0kb downstream 8951 true Scaffold995: 8504-17454 Capsella grandiflora
Cagra.0995s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold995: 15455-17454 Capsella grandiflora
Cagra.0995s0003 5.0kb upstream 5.0kb upstream 11951 true Scaffold995: 3504-15454 Capsella grandiflora
Cagra.0995s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold995: 3504-8503 Capsella grandiflora
Cagra.0995s0003 5.0kb downstream 5.0kb downstream 11951 true Scaffold995: 8504-20454 Capsella grandiflora
Cagra.0995s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold995: 15455-20454 Capsella grandiflora
Cagra.0995s0003 10.0kb upstream 10.0kb upstream 15454 true Scaffold995: 1-15454 Capsella grandiflora
Cagra.0995s0003 10.0kb upstream 10.0kb upstream 8503 false Scaffold995: 1-8503 Capsella grandiflora
Cagra.0995s0003 10.0kb downstream 10.0kb downstream 12169 true Scaffold995: 8504-20672 Capsella grandiflora
Cagra.0995s0003 10.0kb downstream 10.0kb downstream 5218 false Scaffold995: 15455-20672 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369554 5261 Brassicaceae View MSA
123840987 5264 Brassicales-Malvales View MSA
124344763 5266 SBM View MSA
124250505 5268 Malvidae View MSA
124066080 5270 Rosid View MSA
123748320 5271 Pentapetalae View MSA
122790760 5272 Eudicot View MSA
122049960 5273 Angiosperm View MSA
121349504 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain