Gene : Cagra.0996s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31384:SF28 - AUXIN RESPONSE FACTOR 1 Genomic Order:  1
Name:  ? Cagra.0996s0001 Secondary Identifier:  ? PAC:28915887
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0996s0001 0.5kb upstream 0.5kb upstream 5161 true Scaffold996: 1-5161 Capsella grandiflora
Cagra.0996s0001 0.5kb upstream 0.5kb upstream 131 false Scaffold996: 1-131 Capsella grandiflora
Cagra.0996s0001 0.5kb downstream 0.5kb downstream 5530 true Scaffold996: 132-5661 Capsella grandiflora
Cagra.0996s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold996: 5162-5661 Capsella grandiflora
Cagra.0996s0001 1.0kb upstream 1.0kb upstream 5161 true Scaffold996: 1-5161 Capsella grandiflora
Cagra.0996s0001 1.0kb upstream 1.0kb upstream 131 false Scaffold996: 1-131 Capsella grandiflora
Cagra.0996s0001 1.0kb downstream 1.0kb downstream 5707 true Scaffold996: 132-5838 Capsella grandiflora
Cagra.0996s0001 1.0kb downstream 1.0kb downstream 677 false Scaffold996: 5162-5838 Capsella grandiflora
Cagra.0996s0001 2.0kb upstream 2.0kb upstream 5161 true Scaffold996: 1-5161 Capsella grandiflora
Cagra.0996s0001 2.0kb upstream 2.0kb upstream 131 false Scaffold996: 1-131 Capsella grandiflora
Cagra.0996s0001 2.0kb downstream 2.0kb downstream 5707 true Scaffold996: 132-5838 Capsella grandiflora
Cagra.0996s0001 2.0kb downstream 2.0kb downstream 677 false Scaffold996: 5162-5838 Capsella grandiflora
Cagra.0996s0001 5.0kb upstream 5.0kb upstream 5161 true Scaffold996: 1-5161 Capsella grandiflora
Cagra.0996s0001 5.0kb upstream 5.0kb upstream 131 false Scaffold996: 1-131 Capsella grandiflora
Cagra.0996s0001 5.0kb downstream 5.0kb downstream 5707 true Scaffold996: 132-5838 Capsella grandiflora
Cagra.0996s0001 5.0kb downstream 5.0kb downstream 677 false Scaffold996: 5162-5838 Capsella grandiflora
Cagra.0996s0001 10.0kb upstream 10.0kb upstream 5161 true Scaffold996: 1-5161 Capsella grandiflora
Cagra.0996s0001 10.0kb upstream 10.0kb upstream 131 false Scaffold996: 1-131 Capsella grandiflora
Cagra.0996s0001 10.0kb downstream 10.0kb downstream 5707 true Scaffold996: 132-5838 Capsella grandiflora
Cagra.0996s0001 10.0kb downstream 10.0kb downstream 677 false Scaffold996: 5162-5838 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373288 5261 Brassicaceae View MSA
123827866 5264 Brassicales-Malvales View MSA
124345457 5266 SBM View MSA
124240085 5268 Malvidae View MSA
124069092 5270 Rosid View MSA
123739292 5271 Pentapetalae View MSA
122788624 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain