Gene : Cagra.0998s0005 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10641:SF462 - F3O9.29 PROTEIN-RELATED Genomic Order:  5
Name:  ? Cagra.0998s0005 Secondary Identifier:  ? PAC:28904948
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0998s0005 0.5kb upstream 0.5kb upstream 1609 true Scaffold998: 21804-23412 Capsella grandiflora
Cagra.0998s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold998: 22913-23412 Capsella grandiflora
Cagra.0998s0005 0.5kb downstream 0.5kb downstream 1609 true Scaffold998: 21304-22912 Capsella grandiflora
Cagra.0998s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold998: 21304-21803 Capsella grandiflora
Cagra.0998s0005 1.0kb upstream 1.0kb upstream 2109 true Scaffold998: 21804-23912 Capsella grandiflora
Cagra.0998s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold998: 22913-23912 Capsella grandiflora
Cagra.0998s0005 1.0kb downstream 1.0kb downstream 2109 true Scaffold998: 20804-22912 Capsella grandiflora
Cagra.0998s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold998: 20804-21803 Capsella grandiflora
Cagra.0998s0005 2.0kb upstream 2.0kb upstream 3109 true Scaffold998: 21804-24912 Capsella grandiflora
Cagra.0998s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold998: 22913-24912 Capsella grandiflora
Cagra.0998s0005 2.0kb downstream 2.0kb downstream 3109 true Scaffold998: 19804-22912 Capsella grandiflora
Cagra.0998s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold998: 19804-21803 Capsella grandiflora
Cagra.0998s0005 5.0kb upstream 5.0kb upstream 6109 true Scaffold998: 21804-27912 Capsella grandiflora
Cagra.0998s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold998: 22913-27912 Capsella grandiflora
Cagra.0998s0005 5.0kb downstream 5.0kb downstream 6109 true Scaffold998: 16804-22912 Capsella grandiflora
Cagra.0998s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold998: 16804-21803 Capsella grandiflora
Cagra.0998s0005 10.0kb upstream 10.0kb upstream 11109 true Scaffold998: 21804-32912 Capsella grandiflora
Cagra.0998s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold998: 22913-32912 Capsella grandiflora
Cagra.0998s0005 10.0kb downstream 10.0kb downstream 11109 true Scaffold998: 11804-22912 Capsella grandiflora
Cagra.0998s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold998: 11804-21803 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372781 5261 Brassicaceae View MSA
123800432 5264 Brassicales-Malvales View MSA
124297846 5266 SBM View MSA
124249671 5268 Malvidae View MSA
124069456 5270 Rosid View MSA
123753515 5271 Pentapetalae View MSA
122794930 5272 Eudicot View MSA
122045941 5273 Angiosperm View MSA
121350389 5274 Embryophyte View MSA
123381710 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain