Gene : Cagra.0998s0029 C. grandiflora v1.1
Defline:  (1 of 2) 4.99.1.1 - Ferrochelatase / Protoheme ferro-lyase Genomic Order:  29
Name:  ? Cagra.0998s0029 Secondary Identifier:  ? PAC:28904932
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora HEME-BIOSYNTHESIS-II Capsella grandiflora pathologic  
Cgrandiflora PWY-5918 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0998s0029 0.5kb upstream 0.5kb upstream 3277 true Scaffold998: 104386-107662 Capsella grandiflora
Cagra.0998s0029 0.5kb upstream 0.5kb upstream 99 false Scaffold998: 107564-107662 Capsella grandiflora
Cagra.0998s0029 0.5kb downstream 0.5kb downstream 3678 true Scaffold998: 103886-107563 Capsella grandiflora
Cagra.0998s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold998: 103886-104385 Capsella grandiflora
Cagra.0998s0029 1.0kb upstream 1.0kb upstream 3277 true Scaffold998: 104386-107662 Capsella grandiflora
Cagra.0998s0029 1.0kb upstream 1.0kb upstream 99 false Scaffold998: 107564-107662 Capsella grandiflora
Cagra.0998s0029 1.0kb downstream 1.0kb downstream 4178 true Scaffold998: 103386-107563 Capsella grandiflora
Cagra.0998s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold998: 103386-104385 Capsella grandiflora
Cagra.0998s0029 2.0kb upstream 2.0kb upstream 3277 true Scaffold998: 104386-107662 Capsella grandiflora
Cagra.0998s0029 2.0kb upstream 2.0kb upstream 99 false Scaffold998: 107564-107662 Capsella grandiflora
Cagra.0998s0029 2.0kb downstream 2.0kb downstream 5178 true Scaffold998: 102386-107563 Capsella grandiflora
Cagra.0998s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold998: 102386-104385 Capsella grandiflora
Cagra.0998s0029 5.0kb upstream 5.0kb upstream 3277 true Scaffold998: 104386-107662 Capsella grandiflora
Cagra.0998s0029 5.0kb upstream 5.0kb upstream 99 false Scaffold998: 107564-107662 Capsella grandiflora
Cagra.0998s0029 5.0kb downstream 5.0kb downstream 8178 true Scaffold998: 99386-107563 Capsella grandiflora
Cagra.0998s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold998: 99386-104385 Capsella grandiflora
Cagra.0998s0029 10.0kb upstream 10.0kb upstream 3277 true Scaffold998: 104386-107662 Capsella grandiflora
Cagra.0998s0029 10.0kb upstream 10.0kb upstream 99 false Scaffold998: 107564-107662 Capsella grandiflora
Cagra.0998s0029 10.0kb downstream 10.0kb downstream 13178 true Scaffold998: 94386-107563 Capsella grandiflora
Cagra.0998s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold998: 94386-104385 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371335 5261 Brassicaceae View MSA
123834438 5264 Brassicales-Malvales View MSA
124339194 5266 SBM View MSA
124242028 5268 Malvidae View MSA
124062262 5270 Rosid View MSA
123738607 5271 Pentapetalae View MSA
122786704 5272 Eudicot View MSA
122047545 5273 Angiosperm View MSA
121310756 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain