Gene : Cagra.1004s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24177:SF42 - ANKYRIN REPEAT FAMILY PROTEIN Genomic Order:  15
Name:  ? Cagra.1004s0015 Secondary Identifier:  ? PAC:28896541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1004s0015 0.5kb upstream 0.5kb upstream 1622 true Scaffold1004: 65514-67135 Capsella grandiflora
Cagra.1004s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1004: 65514-66013 Capsella grandiflora
Cagra.1004s0015 0.5kb downstream 0.5kb downstream 1622 true Scaffold1004: 66014-67635 Capsella grandiflora
Cagra.1004s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1004: 67136-67635 Capsella grandiflora
Cagra.1004s0015 1.0kb upstream 1.0kb upstream 2122 true Scaffold1004: 65014-67135 Capsella grandiflora
Cagra.1004s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1004: 65014-66013 Capsella grandiflora
Cagra.1004s0015 1.0kb downstream 1.0kb downstream 2122 true Scaffold1004: 66014-68135 Capsella grandiflora
Cagra.1004s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1004: 67136-68135 Capsella grandiflora
Cagra.1004s0015 2.0kb upstream 2.0kb upstream 3122 true Scaffold1004: 64014-67135 Capsella grandiflora
Cagra.1004s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1004: 64014-66013 Capsella grandiflora
Cagra.1004s0015 2.0kb downstream 2.0kb downstream 3122 true Scaffold1004: 66014-69135 Capsella grandiflora
Cagra.1004s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1004: 67136-69135 Capsella grandiflora
Cagra.1004s0015 5.0kb upstream 5.0kb upstream 6122 true Scaffold1004: 61014-67135 Capsella grandiflora
Cagra.1004s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1004: 61014-66013 Capsella grandiflora
Cagra.1004s0015 5.0kb downstream 5.0kb downstream 3210 true Scaffold1004: 66014-69223 Capsella grandiflora
Cagra.1004s0015 5.0kb downstream 5.0kb downstream 2088 false Scaffold1004: 67136-69223 Capsella grandiflora
Cagra.1004s0015 10.0kb upstream 10.0kb upstream 11122 true Scaffold1004: 56014-67135 Capsella grandiflora
Cagra.1004s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1004: 56014-66013 Capsella grandiflora
Cagra.1004s0015 10.0kb downstream 10.0kb downstream 3210 true Scaffold1004: 66014-69223 Capsella grandiflora
Cagra.1004s0015 10.0kb downstream 10.0kb downstream 2088 false Scaffold1004: 67136-69223 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338668 5261 Brassicaceae View MSA
123836748 5264 Brassicales-Malvales View MSA
124349699 5266 SBM View MSA
124253952 5268 Malvidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain