Gene : Cagra.1008s0005 C. grandiflora v1.1
Defline:  (1 of 8) KOG2922 - Uncharacterized conserved protein Genomic Order:  5
Name:  ? Cagra.1008s0005 Secondary Identifier:  ? PAC:28913365
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1008s0005 0.5kb upstream 0.5kb upstream 3368 true Scaffold1008: 20020-23387 Capsella grandiflora
Cagra.1008s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1008: 22888-23387 Capsella grandiflora
Cagra.1008s0005 0.5kb downstream 0.5kb downstream 3368 true Scaffold1008: 19520-22887 Capsella grandiflora
Cagra.1008s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1008: 19520-20019 Capsella grandiflora
Cagra.1008s0005 1.0kb upstream 1.0kb upstream 3868 true Scaffold1008: 20020-23887 Capsella grandiflora
Cagra.1008s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1008: 22888-23887 Capsella grandiflora
Cagra.1008s0005 1.0kb downstream 1.0kb downstream 3868 true Scaffold1008: 19020-22887 Capsella grandiflora
Cagra.1008s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1008: 19020-20019 Capsella grandiflora
Cagra.1008s0005 2.0kb upstream 2.0kb upstream 4029 true Scaffold1008: 20020-24048 Capsella grandiflora
Cagra.1008s0005 2.0kb upstream 2.0kb upstream 1161 false Scaffold1008: 22888-24048 Capsella grandiflora
Cagra.1008s0005 2.0kb downstream 2.0kb downstream 4868 true Scaffold1008: 18020-22887 Capsella grandiflora
Cagra.1008s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1008: 18020-20019 Capsella grandiflora
Cagra.1008s0005 5.0kb upstream 5.0kb upstream 4029 true Scaffold1008: 20020-24048 Capsella grandiflora
Cagra.1008s0005 5.0kb upstream 5.0kb upstream 1161 false Scaffold1008: 22888-24048 Capsella grandiflora
Cagra.1008s0005 5.0kb downstream 5.0kb downstream 7868 true Scaffold1008: 15020-22887 Capsella grandiflora
Cagra.1008s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1008: 15020-20019 Capsella grandiflora
Cagra.1008s0005 10.0kb upstream 10.0kb upstream 4029 true Scaffold1008: 20020-24048 Capsella grandiflora
Cagra.1008s0005 10.0kb upstream 10.0kb upstream 1161 false Scaffold1008: 22888-24048 Capsella grandiflora
Cagra.1008s0005 10.0kb downstream 10.0kb downstream 12868 true Scaffold1008: 10020-22887 Capsella grandiflora
Cagra.1008s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1008: 10020-20019 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343134 5261 Brassicaceae View MSA
123783424 5264 Brassicales-Malvales View MSA
124281659 5266 SBM View MSA
124136379 5268 Malvidae View MSA
123864249 5270 Rosid View MSA
123742244 5271 Pentapetalae View MSA
122790417 5272 Eudicot View MSA
122049852 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain