Gene : Cagra.1013s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR27000:SF185 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PEPR1-RELATED Genomic Order:  3
Name:  ? Cagra.1013s0003 Secondary Identifier:  ? PAC:28916266
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1013s0003 0.5kb upstream 0.5kb upstream 4419 true Scaffold1013: 6435-10853 Capsella grandiflora
Cagra.1013s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1013: 10354-10853 Capsella grandiflora
Cagra.1013s0003 0.5kb downstream 0.5kb downstream 4419 true Scaffold1013: 5935-10353 Capsella grandiflora
Cagra.1013s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1013: 5935-6434 Capsella grandiflora
Cagra.1013s0003 1.0kb upstream 1.0kb upstream 4919 true Scaffold1013: 6435-11353 Capsella grandiflora
Cagra.1013s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1013: 10354-11353 Capsella grandiflora
Cagra.1013s0003 1.0kb downstream 1.0kb downstream 4919 true Scaffold1013: 5435-10353 Capsella grandiflora
Cagra.1013s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1013: 5435-6434 Capsella grandiflora
Cagra.1013s0003 2.0kb upstream 2.0kb upstream 5919 true Scaffold1013: 6435-12353 Capsella grandiflora
Cagra.1013s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1013: 10354-12353 Capsella grandiflora
Cagra.1013s0003 2.0kb downstream 2.0kb downstream 5919 true Scaffold1013: 4435-10353 Capsella grandiflora
Cagra.1013s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1013: 4435-6434 Capsella grandiflora
Cagra.1013s0003 5.0kb upstream 5.0kb upstream 8919 true Scaffold1013: 6435-15353 Capsella grandiflora
Cagra.1013s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1013: 10354-15353 Capsella grandiflora
Cagra.1013s0003 5.0kb downstream 5.0kb downstream 8919 true Scaffold1013: 1435-10353 Capsella grandiflora
Cagra.1013s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1013: 1435-6434 Capsella grandiflora
Cagra.1013s0003 10.0kb upstream 10.0kb upstream 13919 true Scaffold1013: 6435-20353 Capsella grandiflora
Cagra.1013s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1013: 10354-20353 Capsella grandiflora
Cagra.1013s0003 10.0kb downstream 10.0kb downstream 10353 true Scaffold1013: 1-10353 Capsella grandiflora
Cagra.1013s0003 10.0kb downstream 10.0kb downstream 6434 false Scaffold1013: 1-6434 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122788329 5272 Eudicot View MSA
122367022 5261 Brassicaceae View MSA
123831428 5264 Brassicales-Malvales View MSA
124341599 5266 SBM View MSA
124241370 5268 Malvidae View MSA
124066125 5270 Rosid View MSA
123746657 5271 Pentapetalae View MSA
122046482 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain