Gene : Cagra.0993s0018 C. grandiflora v1.1
Defline:  (1 of 3) PF07798 - Protein of unknown function (DUF1640) (DUF1640) Genomic Order:  18
Name:  ? Cagra.0993s0018 Secondary Identifier:  ? PAC:28903491
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0018 0.5kb upstream 0.5kb upstream 1814 true Scaffold993: 55707-57520 Capsella grandiflora
Cagra.0993s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 55707-56206 Capsella grandiflora
Cagra.0993s0018 0.5kb downstream 0.5kb downstream 1814 true Scaffold993: 56207-58020 Capsella grandiflora
Cagra.0993s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 57521-58020 Capsella grandiflora
Cagra.0993s0018 1.0kb upstream 1.0kb upstream 2314 true Scaffold993: 55207-57520 Capsella grandiflora
Cagra.0993s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 55207-56206 Capsella grandiflora
Cagra.0993s0018 1.0kb downstream 1.0kb downstream 2314 true Scaffold993: 56207-58520 Capsella grandiflora
Cagra.0993s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 57521-58520 Capsella grandiflora
Cagra.0993s0018 2.0kb upstream 2.0kb upstream 3314 true Scaffold993: 54207-57520 Capsella grandiflora
Cagra.0993s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 54207-56206 Capsella grandiflora
Cagra.0993s0018 2.0kb downstream 2.0kb downstream 3314 true Scaffold993: 56207-59520 Capsella grandiflora
Cagra.0993s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 57521-59520 Capsella grandiflora
Cagra.0993s0018 5.0kb upstream 5.0kb upstream 6314 true Scaffold993: 51207-57520 Capsella grandiflora
Cagra.0993s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 51207-56206 Capsella grandiflora
Cagra.0993s0018 5.0kb downstream 5.0kb downstream 6314 true Scaffold993: 56207-62520 Capsella grandiflora
Cagra.0993s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 57521-62520 Capsella grandiflora
Cagra.0993s0018 10.0kb upstream 10.0kb upstream 11314 true Scaffold993: 46207-57520 Capsella grandiflora
Cagra.0993s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 46207-56206 Capsella grandiflora
Cagra.0993s0018 10.0kb downstream 10.0kb downstream 11314 true Scaffold993: 56207-67520 Capsella grandiflora
Cagra.0993s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 57521-67520 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499827 5273 Angiosperm View MSA
122338729 5261 Brassicaceae View MSA
123779279 5264 Brassicales-Malvales View MSA
124277608 5266 SBM View MSA
124132795 5268 Malvidae View MSA
123861056 5270 Rosid View MSA
123446628 5271 Pentapetalae View MSA
122482175 5272 Eudicot View MSA
120773163 5274 Embryophyte View MSA
122815485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain