Gene : Cagra.0993s0027 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23084//PTHR23084:SF163 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED Genomic Order:  27
Name:  ? Cagra.0993s0027 Secondary Identifier:  ? PAC:28903501
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0027 0.5kb upstream 0.5kb upstream 3330 true Scaffold993: 91442-94771 Capsella grandiflora
Cagra.0993s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 91442-91941 Capsella grandiflora
Cagra.0993s0027 0.5kb downstream 0.5kb downstream 3330 true Scaffold993: 91942-95271 Capsella grandiflora
Cagra.0993s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 94772-95271 Capsella grandiflora
Cagra.0993s0027 1.0kb upstream 1.0kb upstream 3830 true Scaffold993: 90942-94771 Capsella grandiflora
Cagra.0993s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 90942-91941 Capsella grandiflora
Cagra.0993s0027 1.0kb downstream 1.0kb downstream 3830 true Scaffold993: 91942-95771 Capsella grandiflora
Cagra.0993s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 94772-95771 Capsella grandiflora
Cagra.0993s0027 2.0kb upstream 2.0kb upstream 4830 true Scaffold993: 89942-94771 Capsella grandiflora
Cagra.0993s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 89942-91941 Capsella grandiflora
Cagra.0993s0027 2.0kb downstream 2.0kb downstream 4830 true Scaffold993: 91942-96771 Capsella grandiflora
Cagra.0993s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 94772-96771 Capsella grandiflora
Cagra.0993s0027 5.0kb upstream 5.0kb upstream 7830 true Scaffold993: 86942-94771 Capsella grandiflora
Cagra.0993s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 86942-91941 Capsella grandiflora
Cagra.0993s0027 5.0kb downstream 5.0kb downstream 7830 true Scaffold993: 91942-99771 Capsella grandiflora
Cagra.0993s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 94772-99771 Capsella grandiflora
Cagra.0993s0027 10.0kb upstream 10.0kb upstream 12830 true Scaffold993: 81942-94771 Capsella grandiflora
Cagra.0993s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 81942-91941 Capsella grandiflora
Cagra.0993s0027 10.0kb downstream 10.0kb downstream 12830 true Scaffold993: 91942-104771 Capsella grandiflora
Cagra.0993s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 94772-104771 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380056 5261 Brassicaceae View MSA
123839636 5264 Brassicales-Malvales View MSA
124340371 5266 SBM View MSA
124254332 5268 Malvidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain