Gene : Cagra.0993s0041 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10044:SF133 - MND1-INTERACTING PROTEIN 1 Genomic Order:  41
Name:  ? Cagra.0993s0041 Secondary Identifier:  ? PAC:28903499
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0041 0.5kb upstream 0.5kb upstream 3568 true Scaffold993: 134176-137743 Capsella grandiflora
Cagra.0993s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 134176-134675 Capsella grandiflora
Cagra.0993s0041 0.5kb downstream 0.5kb downstream 3568 true Scaffold993: 134676-138243 Capsella grandiflora
Cagra.0993s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 137744-138243 Capsella grandiflora
Cagra.0993s0041 1.0kb upstream 1.0kb upstream 4068 true Scaffold993: 133676-137743 Capsella grandiflora
Cagra.0993s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 133676-134675 Capsella grandiflora
Cagra.0993s0041 1.0kb downstream 1.0kb downstream 4068 true Scaffold993: 134676-138743 Capsella grandiflora
Cagra.0993s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 137744-138743 Capsella grandiflora
Cagra.0993s0041 2.0kb upstream 2.0kb upstream 5068 true Scaffold993: 132676-137743 Capsella grandiflora
Cagra.0993s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 132676-134675 Capsella grandiflora
Cagra.0993s0041 2.0kb downstream 2.0kb downstream 5068 true Scaffold993: 134676-139743 Capsella grandiflora
Cagra.0993s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 137744-139743 Capsella grandiflora
Cagra.0993s0041 5.0kb upstream 5.0kb upstream 8068 true Scaffold993: 129676-137743 Capsella grandiflora
Cagra.0993s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 129676-134675 Capsella grandiflora
Cagra.0993s0041 5.0kb downstream 5.0kb downstream 8068 true Scaffold993: 134676-142743 Capsella grandiflora
Cagra.0993s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 137744-142743 Capsella grandiflora
Cagra.0993s0041 10.0kb upstream 10.0kb upstream 13068 true Scaffold993: 124676-137743 Capsella grandiflora
Cagra.0993s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 124676-134675 Capsella grandiflora
Cagra.0993s0041 10.0kb downstream 10.0kb downstream 13068 true Scaffold993: 134676-147743 Capsella grandiflora
Cagra.0993s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 137744-147743 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375580 5261 Brassicaceae View MSA
123839871 5264 Brassicales-Malvales View MSA
124337920 5266 SBM View MSA
124244525 5268 Malvidae View MSA
124064892 5270 Rosid View MSA
123750786 5271 Pentapetalae View MSA
122796031 5272 Eudicot View MSA
122045925 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain