Gene : Cagra.0993s0059 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  59
Name:  ? Cagra.0993s0059 Secondary Identifier:  ? PAC:28903424
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0059 0.5kb upstream 0.5kb upstream 2220 true Scaffold993: 186210-188429 Capsella grandiflora
Cagra.0993s0059 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 187930-188429 Capsella grandiflora
Cagra.0993s0059 0.5kb downstream 0.5kb downstream 2220 true Scaffold993: 185710-187929 Capsella grandiflora
Cagra.0993s0059 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 185710-186209 Capsella grandiflora
Cagra.0993s0059 1.0kb upstream 1.0kb upstream 2720 true Scaffold993: 186210-188929 Capsella grandiflora
Cagra.0993s0059 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 187930-188929 Capsella grandiflora
Cagra.0993s0059 1.0kb downstream 1.0kb downstream 2720 true Scaffold993: 185210-187929 Capsella grandiflora
Cagra.0993s0059 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 185210-186209 Capsella grandiflora
Cagra.0993s0059 2.0kb upstream 2.0kb upstream 3720 true Scaffold993: 186210-189929 Capsella grandiflora
Cagra.0993s0059 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 187930-189929 Capsella grandiflora
Cagra.0993s0059 2.0kb downstream 2.0kb downstream 3720 true Scaffold993: 184210-187929 Capsella grandiflora
Cagra.0993s0059 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 184210-186209 Capsella grandiflora
Cagra.0993s0059 5.0kb upstream 5.0kb upstream 6720 true Scaffold993: 186210-192929 Capsella grandiflora
Cagra.0993s0059 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 187930-192929 Capsella grandiflora
Cagra.0993s0059 5.0kb downstream 5.0kb downstream 6720 true Scaffold993: 181210-187929 Capsella grandiflora
Cagra.0993s0059 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 181210-186209 Capsella grandiflora
Cagra.0993s0059 10.0kb upstream 10.0kb upstream 11720 true Scaffold993: 186210-197929 Capsella grandiflora
Cagra.0993s0059 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 187930-197929 Capsella grandiflora
Cagra.0993s0059 10.0kb downstream 10.0kb downstream 11720 true Scaffold993: 176210-187929 Capsella grandiflora
Cagra.0993s0059 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 176210-186209 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372392 5261 Brassicaceae View MSA
123831593 5264 Brassicales-Malvales View MSA
124344913 5266 SBM View MSA
124239199 5268 Malvidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain