Gene : Cagra.0932s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15835:SF2 - NUCLEAR-INTERACTING PARTNER OF ALK Genomic Order:  3
Name:  ? Cagra.0932s0003 Secondary Identifier:  ? PAC:28918584
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0932s0003 0.5kb upstream 0.5kb upstream 3783 true Scaffold932: 7548-11330 Capsella grandiflora
Cagra.0932s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold932: 10831-11330 Capsella grandiflora
Cagra.0932s0003 0.5kb downstream 0.5kb downstream 3783 true Scaffold932: 7048-10830 Capsella grandiflora
Cagra.0932s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold932: 7048-7547 Capsella grandiflora
Cagra.0932s0003 1.0kb upstream 1.0kb upstream 4283 true Scaffold932: 7548-11830 Capsella grandiflora
Cagra.0932s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold932: 10831-11830 Capsella grandiflora
Cagra.0932s0003 1.0kb downstream 1.0kb downstream 4283 true Scaffold932: 6548-10830 Capsella grandiflora
Cagra.0932s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold932: 6548-7547 Capsella grandiflora
Cagra.0932s0003 2.0kb upstream 2.0kb upstream 5283 true Scaffold932: 7548-12830 Capsella grandiflora
Cagra.0932s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold932: 10831-12830 Capsella grandiflora
Cagra.0932s0003 2.0kb downstream 2.0kb downstream 5283 true Scaffold932: 5548-10830 Capsella grandiflora
Cagra.0932s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold932: 5548-7547 Capsella grandiflora
Cagra.0932s0003 5.0kb upstream 5.0kb upstream 8283 true Scaffold932: 7548-15830 Capsella grandiflora
Cagra.0932s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold932: 10831-15830 Capsella grandiflora
Cagra.0932s0003 5.0kb downstream 5.0kb downstream 8283 true Scaffold932: 2548-10830 Capsella grandiflora
Cagra.0932s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold932: 2548-7547 Capsella grandiflora
Cagra.0932s0003 10.0kb upstream 10.0kb upstream 13283 true Scaffold932: 7548-20830 Capsella grandiflora
Cagra.0932s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold932: 10831-20830 Capsella grandiflora
Cagra.0932s0003 10.0kb downstream 10.0kb downstream 10830 true Scaffold932: 1-10830 Capsella grandiflora
Cagra.0932s0003 10.0kb downstream 10.0kb downstream 7547 false Scaffold932: 1-7547 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372038 5261 Brassicaceae View MSA
123828673 5264 Brassicales-Malvales View MSA
124342376 5266 SBM View MSA
124241042 5268 Malvidae View MSA
124062210 5270 Rosid View MSA
123740172 5271 Pentapetalae View MSA
122787275 5272 Eudicot View MSA
122048012 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain