Gene : Cagra.0932s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11564:SF5 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN Genomic Order:  11
Name:  ? Cagra.0932s0011 Secondary Identifier:  ? PAC:28918596
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0932s0011 0.5kb upstream 0.5kb upstream 3471 true Scaffold932: 38593-42063 Capsella grandiflora
Cagra.0932s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold932: 38593-39092 Capsella grandiflora
Cagra.0932s0011 0.5kb downstream 0.5kb downstream 3471 true Scaffold932: 39093-42563 Capsella grandiflora
Cagra.0932s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold932: 42064-42563 Capsella grandiflora
Cagra.0932s0011 1.0kb upstream 1.0kb upstream 3971 true Scaffold932: 38093-42063 Capsella grandiflora
Cagra.0932s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold932: 38093-39092 Capsella grandiflora
Cagra.0932s0011 1.0kb downstream 1.0kb downstream 3971 true Scaffold932: 39093-43063 Capsella grandiflora
Cagra.0932s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold932: 42064-43063 Capsella grandiflora
Cagra.0932s0011 2.0kb upstream 2.0kb upstream 4971 true Scaffold932: 37093-42063 Capsella grandiflora
Cagra.0932s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold932: 37093-39092 Capsella grandiflora
Cagra.0932s0011 2.0kb downstream 2.0kb downstream 4971 true Scaffold932: 39093-44063 Capsella grandiflora
Cagra.0932s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold932: 42064-44063 Capsella grandiflora
Cagra.0932s0011 5.0kb upstream 5.0kb upstream 7971 true Scaffold932: 34093-42063 Capsella grandiflora
Cagra.0932s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold932: 34093-39092 Capsella grandiflora
Cagra.0932s0011 5.0kb downstream 5.0kb downstream 7971 true Scaffold932: 39093-47063 Capsella grandiflora
Cagra.0932s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold932: 42064-47063 Capsella grandiflora
Cagra.0932s0011 10.0kb upstream 10.0kb upstream 12971 true Scaffold932: 29093-42063 Capsella grandiflora
Cagra.0932s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold932: 29093-39092 Capsella grandiflora
Cagra.0932s0011 10.0kb downstream 10.0kb downstream 12971 true Scaffold932: 39093-52063 Capsella grandiflora
Cagra.0932s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold932: 42064-52063 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373551 5261 Brassicaceae View MSA
123828989 5264 Brassicales-Malvales View MSA
124345688 5266 SBM View MSA
124243427 5268 Malvidae View MSA
124067958 5270 Rosid View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain