Gene : Cagra.0946s0010 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32370:SF16 - NON-PHOTOTROPIC HYPOCOTYL-LIKE PROTEIN Genomic Order:  10
Name:  ? Cagra.0946s0010 Secondary Identifier:  ? PAC:28901707
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0946s0010 0.5kb upstream 0.5kb upstream 2301 true Scaffold946: 46523-48823 Capsella grandiflora
Cagra.0946s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold946: 46523-47022 Capsella grandiflora
Cagra.0946s0010 0.5kb downstream 0.5kb downstream 2301 true Scaffold946: 47023-49323 Capsella grandiflora
Cagra.0946s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold946: 48824-49323 Capsella grandiflora
Cagra.0946s0010 1.0kb upstream 1.0kb upstream 2801 true Scaffold946: 46023-48823 Capsella grandiflora
Cagra.0946s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold946: 46023-47022 Capsella grandiflora
Cagra.0946s0010 1.0kb downstream 1.0kb downstream 2801 true Scaffold946: 47023-49823 Capsella grandiflora
Cagra.0946s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold946: 48824-49823 Capsella grandiflora
Cagra.0946s0010 2.0kb upstream 2.0kb upstream 3801 true Scaffold946: 45023-48823 Capsella grandiflora
Cagra.0946s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold946: 45023-47022 Capsella grandiflora
Cagra.0946s0010 2.0kb downstream 2.0kb downstream 3801 true Scaffold946: 47023-50823 Capsella grandiflora
Cagra.0946s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold946: 48824-50823 Capsella grandiflora
Cagra.0946s0010 5.0kb upstream 5.0kb upstream 6801 true Scaffold946: 42023-48823 Capsella grandiflora
Cagra.0946s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold946: 42023-47022 Capsella grandiflora
Cagra.0946s0010 5.0kb downstream 5.0kb downstream 6801 true Scaffold946: 47023-53823 Capsella grandiflora
Cagra.0946s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold946: 48824-53823 Capsella grandiflora
Cagra.0946s0010 10.0kb upstream 10.0kb upstream 11801 true Scaffold946: 37023-48823 Capsella grandiflora
Cagra.0946s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold946: 37023-47022 Capsella grandiflora
Cagra.0946s0010 10.0kb downstream 10.0kb downstream 11801 true Scaffold946: 47023-58823 Capsella grandiflora
Cagra.0946s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold946: 48824-58823 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368601 5261 Brassicaceae View MSA
123799617 5264 Brassicales-Malvales View MSA
124297119 5266 SBM View MSA
124250856 5268 Malvidae View MSA
124065820 5270 Rosid View MSA
123742198 5271 Pentapetalae View MSA
122787661 5272 Eudicot View MSA
122051145 5273 Angiosperm View MSA
121347829 5274 Embryophyte View MSA
123380647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain