Gene : Cagra.0946s0005 C. grandiflora v1.1
Defline:  (1 of 4) PTHR19877 - WD40 REPEAT PROTEIN Genomic Order:  5
Name:  ? Cagra.0946s0005 Secondary Identifier:  ? PAC:28901666
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0946s0005 0.5kb upstream 0.5kb upstream 3059 true Scaffold946: 29113-32171 Capsella grandiflora
Cagra.0946s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold946: 29113-29612 Capsella grandiflora
Cagra.0946s0005 0.5kb downstream 0.5kb downstream 3059 true Scaffold946: 29613-32671 Capsella grandiflora
Cagra.0946s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold946: 32172-32671 Capsella grandiflora
Cagra.0946s0005 1.0kb upstream 1.0kb upstream 3559 true Scaffold946: 28613-32171 Capsella grandiflora
Cagra.0946s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold946: 28613-29612 Capsella grandiflora
Cagra.0946s0005 1.0kb downstream 1.0kb downstream 3559 true Scaffold946: 29613-33171 Capsella grandiflora
Cagra.0946s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold946: 32172-33171 Capsella grandiflora
Cagra.0946s0005 2.0kb upstream 2.0kb upstream 4559 true Scaffold946: 27613-32171 Capsella grandiflora
Cagra.0946s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold946: 27613-29612 Capsella grandiflora
Cagra.0946s0005 2.0kb downstream 2.0kb downstream 4559 true Scaffold946: 29613-34171 Capsella grandiflora
Cagra.0946s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold946: 32172-34171 Capsella grandiflora
Cagra.0946s0005 5.0kb upstream 5.0kb upstream 7559 true Scaffold946: 24613-32171 Capsella grandiflora
Cagra.0946s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold946: 24613-29612 Capsella grandiflora
Cagra.0946s0005 5.0kb downstream 5.0kb downstream 7559 true Scaffold946: 29613-37171 Capsella grandiflora
Cagra.0946s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold946: 32172-37171 Capsella grandiflora
Cagra.0946s0005 10.0kb upstream 10.0kb upstream 12559 true Scaffold946: 19613-32171 Capsella grandiflora
Cagra.0946s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold946: 19613-29612 Capsella grandiflora
Cagra.0946s0005 10.0kb downstream 10.0kb downstream 12559 true Scaffold946: 29613-42171 Capsella grandiflora
Cagra.0946s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold946: 32172-42171 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367780 5261 Brassicaceae View MSA
123837394 5264 Brassicales-Malvales View MSA
124348040 5266 SBM View MSA
124237650 5268 Malvidae View MSA
124065489 5270 Rosid View MSA
123747491 5271 Pentapetalae View MSA
122789179 5272 Eudicot View MSA
122051030 5273 Angiosperm View MSA
121344800 5274 Embryophyte View MSA
123428102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain