Gene : Cagra.0946s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11266:SF16 - PEROXISOMAL MEMBRANE (MPV17/PMP22) FAMILY PROTEIN Genomic Order:  23
Name:  ? Cagra.0946s0023 Secondary Identifier:  ? PAC:28901688
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0946s0023 0.5kb upstream 0.5kb upstream 2396 true Scaffold946: 82856-85251 Capsella grandiflora
Cagra.0946s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold946: 82856-83355 Capsella grandiflora
Cagra.0946s0023 0.5kb downstream 0.5kb downstream 2396 true Scaffold946: 83356-85751 Capsella grandiflora
Cagra.0946s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold946: 85252-85751 Capsella grandiflora
Cagra.0946s0023 1.0kb upstream 1.0kb upstream 2896 true Scaffold946: 82356-85251 Capsella grandiflora
Cagra.0946s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold946: 82356-83355 Capsella grandiflora
Cagra.0946s0023 1.0kb downstream 1.0kb downstream 2896 true Scaffold946: 83356-86251 Capsella grandiflora
Cagra.0946s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold946: 85252-86251 Capsella grandiflora
Cagra.0946s0023 2.0kb upstream 2.0kb upstream 3896 true Scaffold946: 81356-85251 Capsella grandiflora
Cagra.0946s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold946: 81356-83355 Capsella grandiflora
Cagra.0946s0023 2.0kb downstream 2.0kb downstream 3896 true Scaffold946: 83356-87251 Capsella grandiflora
Cagra.0946s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold946: 85252-87251 Capsella grandiflora
Cagra.0946s0023 5.0kb upstream 5.0kb upstream 6896 true Scaffold946: 78356-85251 Capsella grandiflora
Cagra.0946s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold946: 78356-83355 Capsella grandiflora
Cagra.0946s0023 5.0kb downstream 5.0kb downstream 6896 true Scaffold946: 83356-90251 Capsella grandiflora
Cagra.0946s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold946: 85252-90251 Capsella grandiflora
Cagra.0946s0023 10.0kb upstream 10.0kb upstream 11896 true Scaffold946: 73356-85251 Capsella grandiflora
Cagra.0946s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold946: 73356-83355 Capsella grandiflora
Cagra.0946s0023 10.0kb downstream 10.0kb downstream 11896 true Scaffold946: 83356-95251 Capsella grandiflora
Cagra.0946s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold946: 85252-95251 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372194 5261 Brassicaceae View MSA
123833714 5264 Brassicales-Malvales View MSA
124339331 5266 SBM View MSA
124249580 5268 Malvidae View MSA
124069878 5270 Rosid View MSA
123741697 5271 Pentapetalae View MSA
122796269 5272 Eudicot View MSA
122044681 5273 Angiosperm View MSA
121345710 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain