Gene : Cagra.0951s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11206:SF92 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  2
Name:  ? Cagra.0951s0002 Secondary Identifier:  ? PAC:28919886
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0951s0002 0.5kb upstream 0.5kb upstream 2486 true Scaffold951: 19008-21493 Capsella grandiflora
Cagra.0951s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold951: 20994-21493 Capsella grandiflora
Cagra.0951s0002 0.5kb downstream 0.5kb downstream 2486 true Scaffold951: 18508-20993 Capsella grandiflora
Cagra.0951s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold951: 18508-19007 Capsella grandiflora
Cagra.0951s0002 1.0kb upstream 1.0kb upstream 2986 true Scaffold951: 19008-21993 Capsella grandiflora
Cagra.0951s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold951: 20994-21993 Capsella grandiflora
Cagra.0951s0002 1.0kb downstream 1.0kb downstream 2986 true Scaffold951: 18008-20993 Capsella grandiflora
Cagra.0951s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold951: 18008-19007 Capsella grandiflora
Cagra.0951s0002 2.0kb upstream 2.0kb upstream 3986 true Scaffold951: 19008-22993 Capsella grandiflora
Cagra.0951s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold951: 20994-22993 Capsella grandiflora
Cagra.0951s0002 2.0kb downstream 2.0kb downstream 3986 true Scaffold951: 17008-20993 Capsella grandiflora
Cagra.0951s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold951: 17008-19007 Capsella grandiflora
Cagra.0951s0002 5.0kb upstream 5.0kb upstream 4595 true Scaffold951: 19008-23602 Capsella grandiflora
Cagra.0951s0002 5.0kb upstream 5.0kb upstream 2609 false Scaffold951: 20994-23602 Capsella grandiflora
Cagra.0951s0002 5.0kb downstream 5.0kb downstream 6986 true Scaffold951: 14008-20993 Capsella grandiflora
Cagra.0951s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold951: 14008-19007 Capsella grandiflora
Cagra.0951s0002 10.0kb upstream 10.0kb upstream 4595 true Scaffold951: 19008-23602 Capsella grandiflora
Cagra.0951s0002 10.0kb upstream 10.0kb upstream 2609 false Scaffold951: 20994-23602 Capsella grandiflora
Cagra.0951s0002 10.0kb downstream 10.0kb downstream 11986 true Scaffold951: 9008-20993 Capsella grandiflora
Cagra.0951s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold951: 9008-19007 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374971 5261 Brassicaceae View MSA
123829055 5264 Brassicales-Malvales View MSA
124336936 5266 SBM View MSA
124242502 5268 Malvidae View MSA
124064495 5270 Rosid View MSA
123738593 5271 Pentapetalae View MSA
122792210 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain