Gene : Cagra.0926s0046 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33596:SF1 - COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED Genomic Order:  46
Name:  ? Cagra.0926s0046 Secondary Identifier:  ? PAC:28911410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0926s0046 0.5kb upstream 0.5kb upstream 1990 true Scaffold926: 200462-202451 Capsella grandiflora
Cagra.0926s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold926: 201952-202451 Capsella grandiflora
Cagra.0926s0046 0.5kb downstream 0.5kb downstream 1990 true Scaffold926: 199962-201951 Capsella grandiflora
Cagra.0926s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold926: 199962-200461 Capsella grandiflora
Cagra.0926s0046 1.0kb upstream 1.0kb upstream 2490 true Scaffold926: 200462-202951 Capsella grandiflora
Cagra.0926s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold926: 201952-202951 Capsella grandiflora
Cagra.0926s0046 1.0kb downstream 1.0kb downstream 2490 true Scaffold926: 199462-201951 Capsella grandiflora
Cagra.0926s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold926: 199462-200461 Capsella grandiflora
Cagra.0926s0046 2.0kb upstream 2.0kb upstream 3490 true Scaffold926: 200462-203951 Capsella grandiflora
Cagra.0926s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold926: 201952-203951 Capsella grandiflora
Cagra.0926s0046 2.0kb downstream 2.0kb downstream 3490 true Scaffold926: 198462-201951 Capsella grandiflora
Cagra.0926s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold926: 198462-200461 Capsella grandiflora
Cagra.0926s0046 5.0kb upstream 5.0kb upstream 6490 true Scaffold926: 200462-206951 Capsella grandiflora
Cagra.0926s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold926: 201952-206951 Capsella grandiflora
Cagra.0926s0046 5.0kb downstream 5.0kb downstream 6490 true Scaffold926: 195462-201951 Capsella grandiflora
Cagra.0926s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold926: 195462-200461 Capsella grandiflora
Cagra.0926s0046 10.0kb upstream 10.0kb upstream 11490 true Scaffold926: 200462-211951 Capsella grandiflora
Cagra.0926s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold926: 201952-211951 Capsella grandiflora
Cagra.0926s0046 10.0kb downstream 10.0kb downstream 11490 true Scaffold926: 190462-201951 Capsella grandiflora
Cagra.0926s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold926: 190462-200461 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376566 5261 Brassicaceae View MSA
123837629 5264 Brassicales-Malvales View MSA
124338264 5266 SBM View MSA
124246161 5268 Malvidae View MSA
124069489 5270 Rosid View MSA
123743524 5271 Pentapetalae View MSA
122795591 5272 Eudicot View MSA
122043105 5273 Angiosperm View MSA
121346555 5274 Embryophyte View MSA
123380405 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain