Gene : Cagra.0926s0045 C. grandiflora v1.1
Defline:  (1 of 2) PTHR34058:SF1 - OXYGEN-EVOLVING ENHANCER PROTEIN 1-1, CHLOROPLASTIC-RELATED Genomic Order:  45
Name:  ? Cagra.0926s0045 Secondary Identifier:  ? PAC:28911343
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0926s0045 0.5kb upstream 0.5kb upstream 2088 true Scaffold926: 196490-198577 Capsella grandiflora
Cagra.0926s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold926: 198078-198577 Capsella grandiflora
Cagra.0926s0045 0.5kb downstream 0.5kb downstream 2088 true Scaffold926: 195990-198077 Capsella grandiflora
Cagra.0926s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold926: 195990-196489 Capsella grandiflora
Cagra.0926s0045 1.0kb upstream 1.0kb upstream 2588 true Scaffold926: 196490-199077 Capsella grandiflora
Cagra.0926s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold926: 198078-199077 Capsella grandiflora
Cagra.0926s0045 1.0kb downstream 1.0kb downstream 2588 true Scaffold926: 195490-198077 Capsella grandiflora
Cagra.0926s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold926: 195490-196489 Capsella grandiflora
Cagra.0926s0045 2.0kb upstream 2.0kb upstream 3588 true Scaffold926: 196490-200077 Capsella grandiflora
Cagra.0926s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold926: 198078-200077 Capsella grandiflora
Cagra.0926s0045 2.0kb downstream 2.0kb downstream 3588 true Scaffold926: 194490-198077 Capsella grandiflora
Cagra.0926s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold926: 194490-196489 Capsella grandiflora
Cagra.0926s0045 5.0kb upstream 5.0kb upstream 6588 true Scaffold926: 196490-203077 Capsella grandiflora
Cagra.0926s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold926: 198078-203077 Capsella grandiflora
Cagra.0926s0045 5.0kb downstream 5.0kb downstream 6588 true Scaffold926: 191490-198077 Capsella grandiflora
Cagra.0926s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold926: 191490-196489 Capsella grandiflora
Cagra.0926s0045 10.0kb upstream 10.0kb upstream 11588 true Scaffold926: 196490-208077 Capsella grandiflora
Cagra.0926s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold926: 198078-208077 Capsella grandiflora
Cagra.0926s0045 10.0kb downstream 10.0kb downstream 11588 true Scaffold926: 186490-198077 Capsella grandiflora
Cagra.0926s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold926: 186490-196489 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365674 5261 Brassicaceae View MSA
123840363 5264 Brassicales-Malvales View MSA
124341777 5266 SBM View MSA
124237212 5268 Malvidae View MSA
124063467 5270 Rosid View MSA
123739417 5271 Pentapetalae View MSA
122788254 5272 Eudicot View MSA
122047967 5273 Angiosperm View MSA
121344212 5274 Embryophyte View MSA
123425295 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain