Gene : Cagra.0926s0042 C. grandiflora v1.1
Defline:  (1 of 12) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  42
Name:  ? Cagra.0926s0042 Secondary Identifier:  ? PAC:28911465
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0926s0042 0.5kb upstream 0.5kb upstream 1207 true Scaffold926: 190580-191786 Capsella grandiflora
Cagra.0926s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold926: 191287-191786 Capsella grandiflora
Cagra.0926s0042 0.5kb downstream 0.5kb downstream 1207 true Scaffold926: 190080-191286 Capsella grandiflora
Cagra.0926s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold926: 190080-190579 Capsella grandiflora
Cagra.0926s0042 1.0kb upstream 1.0kb upstream 1707 true Scaffold926: 190580-192286 Capsella grandiflora
Cagra.0926s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold926: 191287-192286 Capsella grandiflora
Cagra.0926s0042 1.0kb downstream 1.0kb downstream 1707 true Scaffold926: 189580-191286 Capsella grandiflora
Cagra.0926s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold926: 189580-190579 Capsella grandiflora
Cagra.0926s0042 2.0kb upstream 2.0kb upstream 2707 true Scaffold926: 190580-193286 Capsella grandiflora
Cagra.0926s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold926: 191287-193286 Capsella grandiflora
Cagra.0926s0042 2.0kb downstream 2.0kb downstream 2707 true Scaffold926: 188580-191286 Capsella grandiflora
Cagra.0926s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold926: 188580-190579 Capsella grandiflora
Cagra.0926s0042 5.0kb upstream 5.0kb upstream 5707 true Scaffold926: 190580-196286 Capsella grandiflora
Cagra.0926s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold926: 191287-196286 Capsella grandiflora
Cagra.0926s0042 5.0kb downstream 5.0kb downstream 5707 true Scaffold926: 185580-191286 Capsella grandiflora
Cagra.0926s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold926: 185580-190579 Capsella grandiflora
Cagra.0926s0042 10.0kb upstream 10.0kb upstream 10707 true Scaffold926: 190580-201286 Capsella grandiflora
Cagra.0926s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold926: 191287-201286 Capsella grandiflora
Cagra.0926s0042 10.0kb downstream 10.0kb downstream 10707 true Scaffold926: 180580-191286 Capsella grandiflora
Cagra.0926s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold926: 180580-190579 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343890 5261 Brassicaceae View MSA
123836323 5264 Brassicales-Malvales View MSA
124347969 5266 SBM View MSA
124245112 5268 Malvidae View MSA
124074114 5270 Rosid View MSA
123750243 5271 Pentapetalae View MSA
122790111 5272 Eudicot View MSA
122049805 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain