Gene : Cagra.0926s0079 C. grandiflora v1.1
Defline:  (1 of 4) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  79
Name:  ? Cagra.0926s0079 Secondary Identifier:  ? PAC:28911353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0926s0079 0.5kb upstream 0.5kb upstream 2430 true Scaffold926: 301587-304016 Capsella grandiflora
Cagra.0926s0079 0.5kb upstream 0.5kb upstream 500 false Scaffold926: 301587-302086 Capsella grandiflora
Cagra.0926s0079 0.5kb downstream 0.5kb downstream 2430 true Scaffold926: 302087-304516 Capsella grandiflora
Cagra.0926s0079 0.5kb downstream 0.5kb downstream 500 false Scaffold926: 304017-304516 Capsella grandiflora
Cagra.0926s0079 1.0kb upstream 1.0kb upstream 2930 true Scaffold926: 301087-304016 Capsella grandiflora
Cagra.0926s0079 1.0kb upstream 1.0kb upstream 1000 false Scaffold926: 301087-302086 Capsella grandiflora
Cagra.0926s0079 1.0kb downstream 1.0kb downstream 2930 true Scaffold926: 302087-305016 Capsella grandiflora
Cagra.0926s0079 1.0kb downstream 1.0kb downstream 1000 false Scaffold926: 304017-305016 Capsella grandiflora
Cagra.0926s0079 2.0kb upstream 2.0kb upstream 3930 true Scaffold926: 300087-304016 Capsella grandiflora
Cagra.0926s0079 2.0kb upstream 2.0kb upstream 2000 false Scaffold926: 300087-302086 Capsella grandiflora
Cagra.0926s0079 2.0kb downstream 2.0kb downstream 3930 true Scaffold926: 302087-306016 Capsella grandiflora
Cagra.0926s0079 2.0kb downstream 2.0kb downstream 2000 false Scaffold926: 304017-306016 Capsella grandiflora
Cagra.0926s0079 5.0kb upstream 5.0kb upstream 6930 true Scaffold926: 297087-304016 Capsella grandiflora
Cagra.0926s0079 5.0kb upstream 5.0kb upstream 5000 false Scaffold926: 297087-302086 Capsella grandiflora
Cagra.0926s0079 5.0kb downstream 5.0kb downstream 6930 true Scaffold926: 302087-309016 Capsella grandiflora
Cagra.0926s0079 5.0kb downstream 5.0kb downstream 5000 false Scaffold926: 304017-309016 Capsella grandiflora
Cagra.0926s0079 10.0kb upstream 10.0kb upstream 11930 true Scaffold926: 292087-304016 Capsella grandiflora
Cagra.0926s0079 10.0kb upstream 10.0kb upstream 10000 false Scaffold926: 292087-302086 Capsella grandiflora
Cagra.0926s0079 10.0kb downstream 10.0kb downstream 11930 true Scaffold926: 302087-314016 Capsella grandiflora
Cagra.0926s0079 10.0kb downstream 10.0kb downstream 10000 false Scaffold926: 304017-314016 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381002 5261 Brassicaceae View MSA
123828161 5264 Brassicales-Malvales View MSA
124345690 5266 SBM View MSA
124239923 5268 Malvidae View MSA
124064221 5270 Rosid View MSA
123752035 5271 Pentapetalae View MSA
122790420 5272 Eudicot View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain