Gene : Cagra.0926s0106 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10426:SF4 - FI18644P1-RELATED Genomic Order:  106
Name:  ? Cagra.0926s0106 Secondary Identifier:  ? PAC:28911400
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0926s0106 0.5kb upstream 0.5kb upstream 2169 true Scaffold926: 387999-390167 Capsella grandiflora
Cagra.0926s0106 0.5kb upstream 0.5kb upstream 500 false Scaffold926: 387999-388498 Capsella grandiflora
Cagra.0926s0106 0.5kb downstream 0.5kb downstream 2169 true Scaffold926: 388499-390667 Capsella grandiflora
Cagra.0926s0106 0.5kb downstream 0.5kb downstream 500 false Scaffold926: 390168-390667 Capsella grandiflora
Cagra.0926s0106 1.0kb upstream 1.0kb upstream 2669 true Scaffold926: 387499-390167 Capsella grandiflora
Cagra.0926s0106 1.0kb upstream 1.0kb upstream 1000 false Scaffold926: 387499-388498 Capsella grandiflora
Cagra.0926s0106 1.0kb downstream 1.0kb downstream 2669 true Scaffold926: 388499-391167 Capsella grandiflora
Cagra.0926s0106 1.0kb downstream 1.0kb downstream 1000 false Scaffold926: 390168-391167 Capsella grandiflora
Cagra.0926s0106 2.0kb upstream 2.0kb upstream 3669 true Scaffold926: 386499-390167 Capsella grandiflora
Cagra.0926s0106 2.0kb upstream 2.0kb upstream 2000 false Scaffold926: 386499-388498 Capsella grandiflora
Cagra.0926s0106 2.0kb downstream 2.0kb downstream 3669 true Scaffold926: 388499-392167 Capsella grandiflora
Cagra.0926s0106 2.0kb downstream 2.0kb downstream 2000 false Scaffold926: 390168-392167 Capsella grandiflora
Cagra.0926s0106 5.0kb upstream 5.0kb upstream 6669 true Scaffold926: 383499-390167 Capsella grandiflora
Cagra.0926s0106 5.0kb upstream 5.0kb upstream 5000 false Scaffold926: 383499-388498 Capsella grandiflora
Cagra.0926s0106 5.0kb downstream 5.0kb downstream 6669 true Scaffold926: 388499-395167 Capsella grandiflora
Cagra.0926s0106 5.0kb downstream 5.0kb downstream 5000 false Scaffold926: 390168-395167 Capsella grandiflora
Cagra.0926s0106 10.0kb upstream 10.0kb upstream 11669 true Scaffold926: 378499-390167 Capsella grandiflora
Cagra.0926s0106 10.0kb upstream 10.0kb upstream 10000 false Scaffold926: 378499-388498 Capsella grandiflora
Cagra.0926s0106 10.0kb downstream 10.0kb downstream 11669 true Scaffold926: 388499-400167 Capsella grandiflora
Cagra.0926s0106 10.0kb downstream 10.0kb downstream 10000 false Scaffold926: 390168-400167 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372909 5261 Brassicaceae View MSA
123840194 5264 Brassicales-Malvales View MSA
124339296 5266 SBM View MSA
124239210 5268 Malvidae View MSA
124063956 5270 Rosid View MSA
123752998 5271 Pentapetalae View MSA
122789365 5272 Eudicot View MSA
122048582 5273 Angiosperm View MSA
121348061 5274 Embryophyte View MSA
123427583 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain