Gene : Cagra.0926s0108 C. grandiflora v1.1
Defline:  (1 of 3) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  108
Name:  ? Cagra.0926s0108 Secondary Identifier:  ? PAC:28911348
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6368 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0926s0108 0.5kb upstream 0.5kb upstream 5158 true Scaffold926: 391707-396864 Capsella grandiflora
Cagra.0926s0108 0.5kb upstream 0.5kb upstream 500 false Scaffold926: 391707-392206 Capsella grandiflora
Cagra.0926s0108 0.5kb downstream 0.5kb downstream 5158 true Scaffold926: 392207-397364 Capsella grandiflora
Cagra.0926s0108 0.5kb downstream 0.5kb downstream 500 false Scaffold926: 396865-397364 Capsella grandiflora
Cagra.0926s0108 1.0kb upstream 1.0kb upstream 5658 true Scaffold926: 391207-396864 Capsella grandiflora
Cagra.0926s0108 1.0kb upstream 1.0kb upstream 1000 false Scaffold926: 391207-392206 Capsella grandiflora
Cagra.0926s0108 1.0kb downstream 1.0kb downstream 5658 true Scaffold926: 392207-397864 Capsella grandiflora
Cagra.0926s0108 1.0kb downstream 1.0kb downstream 1000 false Scaffold926: 396865-397864 Capsella grandiflora
Cagra.0926s0108 2.0kb upstream 2.0kb upstream 6658 true Scaffold926: 390207-396864 Capsella grandiflora
Cagra.0926s0108 2.0kb upstream 2.0kb upstream 2000 false Scaffold926: 390207-392206 Capsella grandiflora
Cagra.0926s0108 2.0kb downstream 2.0kb downstream 6658 true Scaffold926: 392207-398864 Capsella grandiflora
Cagra.0926s0108 2.0kb downstream 2.0kb downstream 2000 false Scaffold926: 396865-398864 Capsella grandiflora
Cagra.0926s0108 5.0kb upstream 5.0kb upstream 9658 true Scaffold926: 387207-396864 Capsella grandiflora
Cagra.0926s0108 5.0kb upstream 5.0kb upstream 5000 false Scaffold926: 387207-392206 Capsella grandiflora
Cagra.0926s0108 5.0kb downstream 5.0kb downstream 9658 true Scaffold926: 392207-401864 Capsella grandiflora
Cagra.0926s0108 5.0kb downstream 5.0kb downstream 5000 false Scaffold926: 396865-401864 Capsella grandiflora
Cagra.0926s0108 10.0kb upstream 10.0kb upstream 14658 true Scaffold926: 382207-396864 Capsella grandiflora
Cagra.0926s0108 10.0kb upstream 10.0kb upstream 10000 false Scaffold926: 382207-392206 Capsella grandiflora
Cagra.0926s0108 10.0kb downstream 10.0kb downstream 14658 true Scaffold926: 392207-406864 Capsella grandiflora
Cagra.0926s0108 10.0kb downstream 10.0kb downstream 10000 false Scaffold926: 396865-406864 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376117 5261 Brassicaceae View MSA
123828423 5264 Brassicales-Malvales View MSA
124343568 5266 SBM View MSA
124242227 5268 Malvidae View MSA
124069154 5270 Rosid View MSA
123751013 5271 Pentapetalae View MSA
122793710 5272 Eudicot View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain