Gene : Cagra.0931s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 Genomic Order:  1
Name:  ? Cagra.0931s0001 Secondary Identifier:  ? PAC:28917294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0931s0001 0.5kb upstream 0.5kb upstream 7791 true Scaffold931: 2884-10674 Capsella grandiflora
Cagra.0931s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold931: 2884-3383 Capsella grandiflora
Cagra.0931s0001 0.5kb downstream 0.5kb downstream 7791 true Scaffold931: 3384-11174 Capsella grandiflora
Cagra.0931s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold931: 10675-11174 Capsella grandiflora
Cagra.0931s0001 1.0kb upstream 1.0kb upstream 8291 true Scaffold931: 2384-10674 Capsella grandiflora
Cagra.0931s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold931: 2384-3383 Capsella grandiflora
Cagra.0931s0001 1.0kb downstream 1.0kb downstream 7854 true Scaffold931: 3384-11237 Capsella grandiflora
Cagra.0931s0001 1.0kb downstream 1.0kb downstream 563 false Scaffold931: 10675-11237 Capsella grandiflora
Cagra.0931s0001 2.0kb upstream 2.0kb upstream 9291 true Scaffold931: 1384-10674 Capsella grandiflora
Cagra.0931s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold931: 1384-3383 Capsella grandiflora
Cagra.0931s0001 2.0kb downstream 2.0kb downstream 7854 true Scaffold931: 3384-11237 Capsella grandiflora
Cagra.0931s0001 2.0kb downstream 2.0kb downstream 563 false Scaffold931: 10675-11237 Capsella grandiflora
Cagra.0931s0001 5.0kb upstream 5.0kb upstream 10674 true Scaffold931: 1-10674 Capsella grandiflora
Cagra.0931s0001 5.0kb upstream 5.0kb upstream 3383 false Scaffold931: 1-3383 Capsella grandiflora
Cagra.0931s0001 5.0kb downstream 5.0kb downstream 7854 true Scaffold931: 3384-11237 Capsella grandiflora
Cagra.0931s0001 5.0kb downstream 5.0kb downstream 563 false Scaffold931: 10675-11237 Capsella grandiflora
Cagra.0931s0001 10.0kb upstream 10.0kb upstream 10674 true Scaffold931: 1-10674 Capsella grandiflora
Cagra.0931s0001 10.0kb upstream 10.0kb upstream 3383 false Scaffold931: 1-3383 Capsella grandiflora
Cagra.0931s0001 10.0kb downstream 10.0kb downstream 7854 true Scaffold931: 3384-11237 Capsella grandiflora
Cagra.0931s0001 10.0kb downstream 10.0kb downstream 563 false Scaffold931: 10675-11237 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371497 5261 Brassicaceae View MSA
123834373 5264 Brassicales-Malvales View MSA
124350738 5266 SBM View MSA
124252693 5268 Malvidae View MSA
124066259 5270 Rosid View MSA
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain