Gene : Cagra.0922s0010 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10110:SF117 - SODIUM/HYDROGEN EXCHANGER 1-RELATED Genomic Order:  10
Name:  ? Cagra.0922s0010 Secondary Identifier:  ? PAC:28901611
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0922s0010 0.5kb upstream 0.5kb upstream 4160 true Scaffold922: 30868-35027 Capsella grandiflora
Cagra.0922s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold922: 30868-31367 Capsella grandiflora
Cagra.0922s0010 0.5kb downstream 0.5kb downstream 4160 true Scaffold922: 31368-35527 Capsella grandiflora
Cagra.0922s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold922: 35028-35527 Capsella grandiflora
Cagra.0922s0010 1.0kb upstream 1.0kb upstream 4660 true Scaffold922: 30368-35027 Capsella grandiflora
Cagra.0922s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold922: 30368-31367 Capsella grandiflora
Cagra.0922s0010 1.0kb downstream 1.0kb downstream 4660 true Scaffold922: 31368-36027 Capsella grandiflora
Cagra.0922s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold922: 35028-36027 Capsella grandiflora
Cagra.0922s0010 2.0kb upstream 2.0kb upstream 5660 true Scaffold922: 29368-35027 Capsella grandiflora
Cagra.0922s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold922: 29368-31367 Capsella grandiflora
Cagra.0922s0010 2.0kb downstream 2.0kb downstream 5660 true Scaffold922: 31368-37027 Capsella grandiflora
Cagra.0922s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold922: 35028-37027 Capsella grandiflora
Cagra.0922s0010 5.0kb upstream 5.0kb upstream 8660 true Scaffold922: 26368-35027 Capsella grandiflora
Cagra.0922s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold922: 26368-31367 Capsella grandiflora
Cagra.0922s0010 5.0kb downstream 5.0kb downstream 8660 true Scaffold922: 31368-40027 Capsella grandiflora
Cagra.0922s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold922: 35028-40027 Capsella grandiflora
Cagra.0922s0010 10.0kb upstream 10.0kb upstream 13660 true Scaffold922: 21368-35027 Capsella grandiflora
Cagra.0922s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold922: 21368-31367 Capsella grandiflora
Cagra.0922s0010 10.0kb downstream 10.0kb downstream 11013 true Scaffold922: 31368-42380 Capsella grandiflora
Cagra.0922s0010 10.0kb downstream 10.0kb downstream 7353 false Scaffold922: 35028-42380 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379473 5261 Brassicaceae View MSA
123841290 5264 Brassicales-Malvales View MSA
124337994 5266 SBM View MSA
124252576 5268 Malvidae View MSA
124071378 5270 Rosid View MSA
123745225 5271 Pentapetalae View MSA
122787432 5272 Eudicot View MSA
122047449 5273 Angiosperm View MSA
121351588 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain