Gene : Cagra.0925s0002 C. grandiflora v1.1
Defline:  (1 of 1) 2.1.1.148 - Thymidylate synthase (FAD) / Flavin dependent thymidylate synthase Genomic Order:  2
Name:  ? Cagra.0925s0002 Secondary Identifier:  ? PAC:28917150
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6545 Capsella grandiflora pathologic  
Cgrandiflora TRPSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0925s0002 0.5kb upstream 0.5kb upstream 2859 true Scaffold925: 5652-8510 Capsella grandiflora
Cagra.0925s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold925: 5652-6151 Capsella grandiflora
Cagra.0925s0002 0.5kb downstream 0.5kb downstream 2859 true Scaffold925: 6152-9010 Capsella grandiflora
Cagra.0925s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold925: 8511-9010 Capsella grandiflora
Cagra.0925s0002 1.0kb upstream 1.0kb upstream 3359 true Scaffold925: 5152-8510 Capsella grandiflora
Cagra.0925s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold925: 5152-6151 Capsella grandiflora
Cagra.0925s0002 1.0kb downstream 1.0kb downstream 3359 true Scaffold925: 6152-9510 Capsella grandiflora
Cagra.0925s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold925: 8511-9510 Capsella grandiflora
Cagra.0925s0002 2.0kb upstream 2.0kb upstream 4359 true Scaffold925: 4152-8510 Capsella grandiflora
Cagra.0925s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold925: 4152-6151 Capsella grandiflora
Cagra.0925s0002 2.0kb downstream 2.0kb downstream 4359 true Scaffold925: 6152-10510 Capsella grandiflora
Cagra.0925s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold925: 8511-10510 Capsella grandiflora
Cagra.0925s0002 5.0kb upstream 5.0kb upstream 7359 true Scaffold925: 1152-8510 Capsella grandiflora
Cagra.0925s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold925: 1152-6151 Capsella grandiflora
Cagra.0925s0002 5.0kb downstream 5.0kb downstream 7359 true Scaffold925: 6152-13510 Capsella grandiflora
Cagra.0925s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold925: 8511-13510 Capsella grandiflora
Cagra.0925s0002 10.0kb upstream 10.0kb upstream 8510 true Scaffold925: 1-8510 Capsella grandiflora
Cagra.0925s0002 10.0kb upstream 10.0kb upstream 6151 false Scaffold925: 1-6151 Capsella grandiflora
Cagra.0925s0002 10.0kb downstream 10.0kb downstream 12359 true Scaffold925: 6152-18510 Capsella grandiflora
Cagra.0925s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold925: 8511-18510 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338753 5261 Brassicaceae View MSA
123838470 5264 Brassicales-Malvales View MSA
124346682 5266 SBM View MSA
124240153 5268 Malvidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain