Gene : Cagra.0925s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Genomic Order:  8
Name:  ? Cagra.0925s0008 Secondary Identifier:  ? PAC:28917119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0925s0008 0.5kb upstream 0.5kb upstream 3116 true Scaffold925: 31852-34967 Capsella grandiflora
Cagra.0925s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold925: 34468-34967 Capsella grandiflora
Cagra.0925s0008 0.5kb downstream 0.5kb downstream 3116 true Scaffold925: 31352-34467 Capsella grandiflora
Cagra.0925s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold925: 31352-31851 Capsella grandiflora
Cagra.0925s0008 1.0kb upstream 1.0kb upstream 3616 true Scaffold925: 31852-35467 Capsella grandiflora
Cagra.0925s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold925: 34468-35467 Capsella grandiflora
Cagra.0925s0008 1.0kb downstream 1.0kb downstream 3616 true Scaffold925: 30852-34467 Capsella grandiflora
Cagra.0925s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold925: 30852-31851 Capsella grandiflora
Cagra.0925s0008 2.0kb upstream 2.0kb upstream 4616 true Scaffold925: 31852-36467 Capsella grandiflora
Cagra.0925s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold925: 34468-36467 Capsella grandiflora
Cagra.0925s0008 2.0kb downstream 2.0kb downstream 4616 true Scaffold925: 29852-34467 Capsella grandiflora
Cagra.0925s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold925: 29852-31851 Capsella grandiflora
Cagra.0925s0008 5.0kb upstream 5.0kb upstream 7616 true Scaffold925: 31852-39467 Capsella grandiflora
Cagra.0925s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold925: 34468-39467 Capsella grandiflora
Cagra.0925s0008 5.0kb downstream 5.0kb downstream 7616 true Scaffold925: 26852-34467 Capsella grandiflora
Cagra.0925s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold925: 26852-31851 Capsella grandiflora
Cagra.0925s0008 10.0kb upstream 10.0kb upstream 12616 true Scaffold925: 31852-44467 Capsella grandiflora
Cagra.0925s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold925: 34468-44467 Capsella grandiflora
Cagra.0925s0008 10.0kb downstream 10.0kb downstream 12616 true Scaffold925: 21852-34467 Capsella grandiflora
Cagra.0925s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold925: 21852-31851 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378349 5261 Brassicaceae View MSA
123836486 5264 Brassicales-Malvales View MSA
124343571 5266 SBM View MSA
124251454 5268 Malvidae View MSA
124073385 5270 Rosid View MSA
123737180 5271 Pentapetalae View MSA
122791950 5272 Eudicot View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain