Gene : Cagra.0925s0043 C. grandiflora v1.1
Defline:  (1 of 20) PF05701 - Weak chloroplast movement under blue light Genomic Order:  43
Name:  ? Cagra.0925s0043 Secondary Identifier:  ? PAC:28917112
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0925s0043 0.5kb upstream 0.5kb upstream 2710 true Scaffold925: 151163-153872 Capsella grandiflora
Cagra.0925s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold925: 151163-151662 Capsella grandiflora
Cagra.0925s0043 0.5kb downstream 0.5kb downstream 2710 true Scaffold925: 151663-154372 Capsella grandiflora
Cagra.0925s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold925: 153873-154372 Capsella grandiflora
Cagra.0925s0043 1.0kb upstream 1.0kb upstream 3210 true Scaffold925: 150663-153872 Capsella grandiflora
Cagra.0925s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold925: 150663-151662 Capsella grandiflora
Cagra.0925s0043 1.0kb downstream 1.0kb downstream 3210 true Scaffold925: 151663-154872 Capsella grandiflora
Cagra.0925s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold925: 153873-154872 Capsella grandiflora
Cagra.0925s0043 2.0kb upstream 2.0kb upstream 4210 true Scaffold925: 149663-153872 Capsella grandiflora
Cagra.0925s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold925: 149663-151662 Capsella grandiflora
Cagra.0925s0043 2.0kb downstream 2.0kb downstream 4210 true Scaffold925: 151663-155872 Capsella grandiflora
Cagra.0925s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold925: 153873-155872 Capsella grandiflora
Cagra.0925s0043 5.0kb upstream 5.0kb upstream 7210 true Scaffold925: 146663-153872 Capsella grandiflora
Cagra.0925s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold925: 146663-151662 Capsella grandiflora
Cagra.0925s0043 5.0kb downstream 5.0kb downstream 7210 true Scaffold925: 151663-158872 Capsella grandiflora
Cagra.0925s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold925: 153873-158872 Capsella grandiflora
Cagra.0925s0043 10.0kb upstream 10.0kb upstream 12210 true Scaffold925: 141663-153872 Capsella grandiflora
Cagra.0925s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold925: 141663-151662 Capsella grandiflora
Cagra.0925s0043 10.0kb downstream 10.0kb downstream 12210 true Scaffold925: 151663-163872 Capsella grandiflora
Cagra.0925s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold925: 153873-163872 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373209 5261 Brassicaceae View MSA
123800513 5264 Brassicales-Malvales View MSA
124297921 5266 SBM View MSA
124149694 5268 Malvidae View MSA
124068222 5270 Rosid View MSA
123738917 5271 Pentapetalae View MSA
122794264 5272 Eudicot View MSA
122043460 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain