Gene : Cagra.0925s0064 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23089:SF12 - HIS TRIAD FAMILY PROTEIN 3 Genomic Order:  64
Name:  ? Cagra.0925s0064 Secondary Identifier:  ? PAC:28917180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0925s0064 0.5kb upstream 0.5kb upstream 2217 true Scaffold925: 225123-227339 Capsella grandiflora
Cagra.0925s0064 0.5kb upstream 0.5kb upstream 500 false Scaffold925: 225123-225622 Capsella grandiflora
Cagra.0925s0064 0.5kb downstream 0.5kb downstream 2217 true Scaffold925: 225623-227839 Capsella grandiflora
Cagra.0925s0064 0.5kb downstream 0.5kb downstream 500 false Scaffold925: 227340-227839 Capsella grandiflora
Cagra.0925s0064 1.0kb upstream 1.0kb upstream 2717 true Scaffold925: 224623-227339 Capsella grandiflora
Cagra.0925s0064 1.0kb upstream 1.0kb upstream 1000 false Scaffold925: 224623-225622 Capsella grandiflora
Cagra.0925s0064 1.0kb downstream 1.0kb downstream 2717 true Scaffold925: 225623-228339 Capsella grandiflora
Cagra.0925s0064 1.0kb downstream 1.0kb downstream 1000 false Scaffold925: 227340-228339 Capsella grandiflora
Cagra.0925s0064 2.0kb upstream 2.0kb upstream 3717 true Scaffold925: 223623-227339 Capsella grandiflora
Cagra.0925s0064 2.0kb upstream 2.0kb upstream 2000 false Scaffold925: 223623-225622 Capsella grandiflora
Cagra.0925s0064 2.0kb downstream 2.0kb downstream 3717 true Scaffold925: 225623-229339 Capsella grandiflora
Cagra.0925s0064 2.0kb downstream 2.0kb downstream 2000 false Scaffold925: 227340-229339 Capsella grandiflora
Cagra.0925s0064 5.0kb upstream 5.0kb upstream 6717 true Scaffold925: 220623-227339 Capsella grandiflora
Cagra.0925s0064 5.0kb upstream 5.0kb upstream 5000 false Scaffold925: 220623-225622 Capsella grandiflora
Cagra.0925s0064 5.0kb downstream 5.0kb downstream 6717 true Scaffold925: 225623-232339 Capsella grandiflora
Cagra.0925s0064 5.0kb downstream 5.0kb downstream 5000 false Scaffold925: 227340-232339 Capsella grandiflora
Cagra.0925s0064 10.0kb upstream 10.0kb upstream 11717 true Scaffold925: 215623-227339 Capsella grandiflora
Cagra.0925s0064 10.0kb upstream 10.0kb upstream 10000 false Scaffold925: 215623-225622 Capsella grandiflora
Cagra.0925s0064 10.0kb downstream 10.0kb downstream 11717 true Scaffold925: 225623-237339 Capsella grandiflora
Cagra.0925s0064 10.0kb downstream 10.0kb downstream 10000 false Scaffold925: 227340-237339 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361055 5261 Brassicaceae View MSA
123833585 5264 Brassicales-Malvales View MSA
124339014 5266 SBM View MSA
124240421 5268 Malvidae View MSA
124066707 5270 Rosid View MSA
123736753 5271 Pentapetalae View MSA
122786513 5272 Eudicot View MSA
122041956 5273 Angiosperm View MSA
121349409 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain